y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G219200.3 |
Family | GH3 |
Protein Properties | Length: 532 Molecular Weight: 58252.6 Isoelectric Point: 7.4921 |
Chromosome | Chromosome/Scaffold: 02 Start: 57255999 End: 57258256 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 1 | 85 | 6.3e-27 |
MPPFRSCIEEGKASGIMCAYNRVNGVPNCADYNLLSKTARAQWGFNGYITSDCDAVSIIHEEQGYAKLPEDAVADVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 532 Download |
MPPFRSCIEE GKASGIMCAY NRVNGVPNCA DYNLLSKTAR AQWGFNGYIT SDCDAVSIIH 60 EEQGYAKLPE DAVADVLKAG MDVNCGNYLK NYTKSAVVKR KLPISEIDRA LHNLFSVRMR 120 LGLFDGNPLQ QPFGKIGPDQ VCSQEHQNLA LEAARSSIVL LKNNYRLLPF SKAKTASLAV 180 IGPNANSAKT LLGNYAGPPC KTVTPLQGLQ RYVKDITYHP GCNAVNCSYA LTDQAVKVAK 240 GAEYVVLVMG LDQTQEREEL DRVDLVLSPK QQNLISIVAR AAKNPVVLVL LSGGPVDISF 300 AKYDKHIGSI LWAGYPGEAG GLALAEIIFG DHNPGGRLPV TWYPQSFVKV PMTDMRMRPE 360 PSSGYPGRTY RFYQGQKVFE FGYGLSYSNY SYEFLPVAQN TVYLNHPVKS PKAELENSNA 420 LKHIPVSEIG TELCNKRIPV TVRAQNHGDM AGRHPLLLFV RSAKAGNGRP EKQLVAFQSV 480 ILNAGERADV EFELSPCEHL STANEDGLMV IEEGSHFLSI EDKESEITVI L* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00933 | Glyco_hydro_3 | 4.0e-23 | 1 | 110 | 113 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 2.0e-25 | 2 | 223 | 225 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-56 | 158 | 388 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 7.0e-66 | 1 | 496 | 541 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 2 | 529 | 533 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 2 | 531 | 246 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 2 | 531 | 248 | 742 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 2 | 531 | 245 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 2 | 531 | 245 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 2 | 531 | 246 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 1e-39 | 1 | 506 | 210 | 707 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u48_A | 1e-39 | 1 | 506 | 210 | 707 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u4a_B | 5e-39 | 1 | 506 | 210 | 707 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 3u4a_A | 5e-39 | 1 | 506 | 210 | 707 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 Complexed With Udp-Glucose |
PDB | 4i8d_B | 4e-24 | 3 | 527 | 189 | 705 | A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES807938 | 318 | 213 | 530 | 0 |
ES825615 | 246 | 8 | 253 | 0 |
ES827253 | 222 | 8 | 229 | 0 |
ES820033 | 222 | 292 | 513 | 0 |
CO082508 | 208 | 325 | 532 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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