Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.002G219500.1 |
Family | GH3 |
Protein Properties | Length: 583 Molecular Weight: 63057.5 Isoelectric Point: 8.9783 |
Chromosome | Chromosome/Scaffold: 02 Start: 57331063 End: 57334067 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 107 | 340 | 0 |
STRLGIPMIYGIDAVHGHNNVMNATIFPRNVGLGVTRDPQLLKEIGAATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDHRIVQQLTEIINGLQG EAKTDMKGMPYVNGKTKVAGSSKHYVGDGGTVKGINENNTIVDDSALYGMHMAAYVNSVAKGIATIMASYSSINGVKMHAHKQLLTDYHKGKLGFKGFII SDWEGIDRITSPAHSNYSYSIQASINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 583 Download |
MSRKSVSLVG LVLLCCHASL TEQRLQGIFK DPKEPIDERV KDLLGKMNLE EKVGQMTQIE 60 RKNASAEVLK SYFIGSVLSG GGSTPKVNAT VKEWVDMVNG MQQASLSTRL GIPMIYGIDA 120 VHGHNNVMNA TIFPRNVGLG VTRDPQLLKE IGAATALEVR ATGIPYAFAP CIAVCRDPRW 180 GRCYESYSED HRIVQQLTEI INGLQGEAKT DMKGMPYVNG KTKVAGSSKH YVGDGGTVKG 240 INENNTIVDD SALYGMHMAA YVNSVAKGIA TIMASYSSIN GVKMHAHKQL LTDYHKGKLG 300 FKGFIISDWE GIDRITSPAH SNYSYSIQAS INAGIDMVMV PYNYTEFYDG LIDLVKKNAI 360 PMSRIDDAVS RILRVKFAMG LFENPLGDYS LINEVGSQKH RELARQAVRK SLVLLKNGKP 420 GNAPILPLPK NAGKIVVAGS HANNLGYQCG GWTIEWQGVS GNNWTAGTTI LDGIKATVDK 480 RTKVVYKKKP SDTYSSKGKM DYGIVVVGEV PYAETNGDSQ NLTIPAPGPA VIENVCKETK 540 CVVIIVSGRP VVIEPYVDKI DALVAAWLPG SEGQGQAGSY LV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-29 | 104 | 577 | 525 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-33 | 412 | 577 | 179 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-63 | 16 | 573 | 613 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 5.0e-84 | 47 | 454 | 418 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-86 | 48 | 375 | 332 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ17461.1 | 0 | 29 | 575 | 28 | 575 | beta-D-glucosidase [Gossypium hirsutum] |
GenBank | ABK95015.1 | 0 | 1 | 581 | 1 | 579 | unknown [Populus trichocarpa] |
EMBL | CAA07070.1 | 0 | 1 | 575 | 1 | 576 | beta-D-glucosidase [Tropaeolum majus] |
RefSeq | XP_002311926.1 | 0 | 1 | 577 | 1 | 585 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514453.1 | 0 | 1 | 575 | 1 | 573 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1x39_A | 0 | 28 | 575 | 4 | 552 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1x38_A | 0 | 28 | 575 | 4 | 552 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1lq2_A | 0 | 28 | 575 | 4 | 552 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1j8v_A | 0 | 28 | 575 | 4 | 552 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
PDB | 1iex_A | 0 | 28 | 575 | 4 | 552 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |