| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G225800.1 |
| Family | GH51 |
| Protein Properties | Length: 709 Molecular Weight: 78376.3 Isoelectric Point: 5.1204 |
| Chromosome | Chromosome/Scaffold: 02 Start: 58166111 End: 58176967 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 253 | 689 | 0 |
| TTSKNGVVWFDQVSAMPLDTYKGHGFRNELAEMLADIKPRFIRFPGGCFVEGEWLRNAFRWKASVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLG ALPIWVFNNGISHNDQVDTSSVLPFVQEALDGIEFARGDASSTWGSVRAAMGHPEPFDLKYVAIGNEDCGKKNYRGNYLKFYDAIKRTYPDIKIITNCDG SSLPLDHPTDLYDFHVYTSANNLFSMSHKFDRTTRQGPKAFVSEYAVTGKDAGTGSLLAALAEAAFLIGLEKNSDVVHMASYAPLFVNSNDRRWNPDAIV FNSFQVYGTPSYWVQRFFTESSGATLLNATLQKDSSNSLVASAITWKNSEDGQTYIRIKVVNFGSNSVNLQISVDGLDPNSVKLSGSTKTTLTSANLMDE NSFKEPKKVAPNQTLLEDAQEMSALLRPHSFTSFDLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 709 Download |
| MLIASSHHSQ YFHLIWVSLL FLFRSQSVCA VSKAMGYCKA PCVFLLCLFI SFCLPRQLLA 60 DEVDKNLTAQ LFIDASEQSS RPIPQTLFGI FFEEINHAGA GGLWAELVSN RGFEAGGANI 120 PSNIDPWSII GDESSIIVST DRSSCFERNK VALKMEVLCN TDGTHICPSG GVGIYNPGFW 180 GMNIEQGKSY KIVFYVRSTG AIDISVSFTS SDGLQTLSST NIKASASDVS NWTKMEVLLE 240 AKETNHNSRL QLTTSKNGVV WFDQVSAMPL DTYKGHGFRN ELAEMLADIK PRFIRFPGGC 300 FVEGEWLRNA FRWKASVGPW EERPGHFGDV WMYWTDDGLG YFEFLQLAED LGALPIWVFN 360 NGISHNDQVD TSSVLPFVQE ALDGIEFARG DASSTWGSVR AAMGHPEPFD LKYVAIGNED 420 CGKKNYRGNY LKFYDAIKRT YPDIKIITNC DGSSLPLDHP TDLYDFHVYT SANNLFSMSH 480 KFDRTTRQGP KAFVSEYAVT GKDAGTGSLL AALAEAAFLI GLEKNSDVVH MASYAPLFVN 540 SNDRRWNPDA IVFNSFQVYG TPSYWVQRFF TESSGATLLN ATLQKDSSNS LVASAITWKN 600 SEDGQTYIRI KVVNFGSNSV NLQISVDGLD PNSVKLSGST KTTLTSANLM DENSFKEPKK 660 VAPNQTLLED AQEMSALLRP HSFTSFDLLK ESVSLRITED DSSLVSSI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-29 | 523 | 682 | 170 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 2.0e-30 | 277 | 424 | 153 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 2.0e-35 | 523 | 682 | 166 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 35 | 708 | 1 | 675 | alpha-L-arabinofuranosidase [Malus x domestica] |
| GenBank | ABF22680.3 | 0 | 53 | 708 | 18 | 677 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 53 | 708 | 18 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 35 | 708 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002523672.1 | 0 | 60 | 708 | 31 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ug5_F | 5e-19 | 277 | 688 | 68 | 501 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3ug5_E | 5e-19 | 277 | 688 | 68 | 501 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3ug5_D | 5e-19 | 277 | 688 | 68 | 501 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3ug5_C | 5e-19 | 277 | 688 | 68 | 501 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3ug5_B | 5e-19 | 277 | 688 | 68 | 501 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
