| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G225800.2 |
| Family | GH51 |
| Protein Properties | Length: 675 Molecular Weight: 74486.7 Isoelectric Point: 4.8287 |
| Chromosome | Chromosome/Scaffold: 02 Start: 58166111 End: 58176967 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH51 | 219 | 655 | 0 |
| TTSKNGVVWFDQVSAMPLDTYKGHGFRNELAEMLADIKPRFIRFPGGCFVEGEWLRNAFRWKASVGPWEERPGHFGDVWMYWTDDGLGYFEFLQLAEDLG ALPIWVFNNGISHNDQVDTSSVLPFVQEALDGIEFARGDASSTWGSVRAAMGHPEPFDLKYVAIGNEDCGKKNYRGNYLKFYDAIKRTYPDIKIITNCDG SSLPLDHPTDLYDFHVYTSANNLFSMSHKFDRTTRQGPKAFVSEYAVTGKDAGTGSLLAALAEAAFLIGLEKNSDVVHMASYAPLFVNSNDRRWNPDAIV FNSFQVYGTPSYWVQRFFTESSGATLLNATLQKDSSNSLVASAITWKNSEDGQTYIRIKVVNFGSNSVNLQISVDGLDPNSVKLSGSTKTTLTSANLMDE NSFKEPKKVAPNQTLLEDAQEMSALLRPHSFTSFDLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 675 Download |
| MGYCKAPCVF LLCLFISFCL PRQLLADEVD KNLTAQLFID ASEQSSRPIP QTLFGIFFEE 60 INHAGAGGLW AELVSNRGFE AGGANIPSNI DPWSIIGDES SIIVSTDRSS CFERNKVALK 120 MEVLCNTDGT HICPSGGVGI YNPGFWGMNI EQGKSYKIVF YVRSTGAIDI SVSFTSSDGL 180 QTLSSTNIKA SASDVSNWTK MEVLLEAKET NHNSRLQLTT SKNGVVWFDQ VSAMPLDTYK 240 GHGFRNELAE MLADIKPRFI RFPGGCFVEG EWLRNAFRWK ASVGPWEERP GHFGDVWMYW 300 TDDGLGYFEF LQLAEDLGAL PIWVFNNGIS HNDQVDTSSV LPFVQEALDG IEFARGDASS 360 TWGSVRAAMG HPEPFDLKYV AIGNEDCGKK NYRGNYLKFY DAIKRTYPDI KIITNCDGSS 420 LPLDHPTDLY DFHVYTSANN LFSMSHKFDR TTRQGPKAFV SEYAVTGKDA GTGSLLAALA 480 EAAFLIGLEK NSDVVHMASY APLFVNSNDR RWNPDAIVFN SFQVYGTPSY WVQRFFTESS 540 GATLLNATLQ KDSSNSLVAS AITWKNSEDG QTYIRIKVVN FGSNSVNLQI SVDGLDPNSV 600 KLSGSTKTTL TSANLMDENS FKEPKKVAPN QTLLEDAQEM SALLRPHSFT SFDLLKESVS 660 LRITEDDSSL VSSI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 3.0e-29 | 489 | 648 | 170 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 3.0e-30 | 243 | 390 | 153 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 1.0e-35 | 489 | 648 | 166 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF22680.3 | 0 | 19 | 674 | 18 | 677 | alpha-L-arabinofuranosidase [Prunus persica] |
| GenBank | ABV32544.1 | 0 | 19 | 674 | 18 | 677 | alpha-L-arabinofuranosidase protein [Prunus persica] |
| DDBJ | BAF42035.1 | 0 | 1 | 674 | 1 | 675 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 1 | 674 | 1 | 670 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 26 | 674 | 31 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4atw_F | 5e-19 | 243 | 654 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_E | 5e-19 | 243 | 654 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_D | 5e-19 | 243 | 654 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_C | 5e-19 | 243 | 654 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
| PDB | 4atw_B | 5e-19 | 243 | 654 | 48 | 481 | A Chain A, The Crystal Structure Of Arabinofuranosidase |
