| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G235100.1 |
| Family | GT4 |
| Protein Properties | Length: 793 Molecular Weight: 89655.9 Isoelectric Point: 7.7268 |
| Chromosome | Chromosome/Scaffold: 02 Start: 59555124 End: 59562274 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT4 | 549 | 651 | 8.2e-21 |
| AYFLGKMVWAKGYKELIDLLAKHKNDLDGFKLDVYGNGEDAHEVQSTAKRLNLNLNFLKGRDHADDSLHGYKIFINPSVSDVLCTATAEALAMGKFVVCA DHP | |||
| Full Sequence |
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| Protein Sequence Length: 793 Download |
| MDKGSQTTAA VVATTTTTTS NSSAFSFISK GWREVRDSAD ADLQLMKDRA NTFKNLAASF 60 DREIENLIQS ATPTFSVPAI RQSSEIDFMK KLQPKISEFR RVYSAPEISR RVMEKWGPRA 120 KLGIDLSRIR SAIVAEVDET EEEDMYGIVE FNKFKKGRRA RFTEEGQFGD WEPIRALKTR 180 LREFEKKNAS VEIFGGFKNS EFVEKVKSSL KAIIKEPQES KDVPALDVPE LLAYLVRQSG 240 PFLDQLGVRR DLCDKIVESL CSKRKNQLVL RSLAEGEPPT VDGDKINDEL DLRIASVLQS 300 TGHCYEGGFW TDFVKHDVSD GKRHVAIVTT ASLPWMTGTA VNPLFRAAYL AKSAKQKVTL 360 LVPWLCRSDQ ELVYPNNLTF SSPEEQENYI RNWLEERTGF KADFKISFYP GKFSKERRSI 420 IPAGDTSQFI PSKDADICIL EEPEHLNWYH HGKRWTDKFN HVVGIVHTNY LEYIKREKNG 480 ALQAFLVKHI NNWVTRAYCH KVLRLSAATQ DLPKSVICNV HGVNPKFLKI GEKVAEEREL 540 GQQAFSKEAY FLGKMVWAKG YKELIDLLAK HKNDLDGFKL DVYGNGEDAH EVQSTAKRLN 600 LNLNFLKGRD HADDSLHGYK IFINPSVSDV LCTATAEALA MGKFVVCADH PSNEFFRSFP 660 NCLTYKSSED FVAKVKEALA NEPQPLTPEQ IYNLSWEAAT QRFVEYSELD RVLNNRHNPA 720 KVGSKIIAKS SSLPNLSEIV DGGLAFAHYC LTGNELLRLC TGAIPGTRDY DKQHCKDLHL 780 LPPQVENPIY GW* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00534 | Glycos_transf_1 | 4.0e-11 | 551 | 683 | 140 | + Glycosyl transferases group 1. Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. | ||
| COG0438 | RfaG | 1.0e-11 | 443 | 716 | 294 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| TIGR00032 | argG | 8.0e-13 | 406 | 682 | 311 | + argininosuccinate synthase. argG in bacteria, ARG1 in Saccharomyces cerevisiae. There is a very unusual clustering in the alignment, with a deep split between one cohort of E. coli, H. influenzae, and Streptomyces, and the other cohort of eukaryotes, archaea, and the rest of the eubacteria [Amino acid biosynthesis, Glutamate family]. | ||
| PLN02501 | PLN02501 | 0 | 20 | 792 | 790 | + digalactosyldiacylglycerol synthase | ||
| PLN02846 | PLN02846 | 0 | 322 | 783 | 462 | + digalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABA55727.1 | 0 | 12 | 792 | 1 | 780 | digalactosyldiacylglycerol synthase 1 [Vigna unguiculata] |
| Swiss-Prot | Q6DW74 | 0 | 12 | 792 | 1 | 786 | DGDG1_LOTJA RecName: Full=Digalactosyldiacylglycerol synthase 1, chloroplastic; Flags: Precursor |
| RefSeq | XP_002264659.1 | 0 | 19 | 792 | 17 | 797 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323386.1 | 0 | 11 | 792 | 3 | 793 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002533901.1 | 0 | 17 | 792 | 5 | 797 | galactolipid galactosyltransferase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO795393 | 404 | 394 | 793 | 0 |
| ES813055 | 384 | 275 | 654 | 0 |
| GO850017 | 333 | 315 | 647 | 0 |
| ES818203 | 340 | 20 | 357 | 0 |
| JG452150 | 286 | 485 | 770 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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