| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.002G238500.1 |
| Family | AA3 |
| Protein Properties | Length: 879 Molecular Weight: 97972.7 Isoelectric Point: 9.369 |
| Chromosome | Chromosome/Scaffold: 02 Start: 60211818 End: 60216460 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 160 | 443 | 2.5e-23 |
| KLGGILFMSRFRSASVHLLGGCNASSDSSDGVCDPNGQVFDPEVPGLVHQGLYVCDASLIPCSVGVNPCLTIAAAAEHVCKDLVNNVLKYKTKTCTNSVS KVVDQNPPIETHDTLKSSETSYVSVKETLRGYIGGMPCTATLRMKINLQNSNDFDDWNYSIMRKSLLTLKGKVGGYVVFRAIEKDKLHVIDGEVKMFEVN YRTPYTQYMHYRLLLAAASGSRYVLEGKKIMNPYLFAIFSRKETTTLYVTFKRVSGNFAEDHHVGLNLKGKLKVSMIQLLKTLL | |||
| Full Sequence |
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| Protein Sequence Length: 879 Download |
| MRGLKISKAL GSGFSCNGNT VAYLCGSNGP LNGYGLDKKQ LSKIPIQARP GPSISSSYSS 60 SLGFTIQSAV LPTAYPYLLF KGITTFGWPT GYWFFHGIID KLKHLIGSKS SQAMVLLAMG 120 HDKSDGKIIL DKETNKIIFS PPHDPLLPQK VKAFQKITRK LGGILFMSRF RSASVHLLGG 180 CNASSDSSDG VCDPNGQVFD PEVPGLVHQG LYVCDASLIP CSVGVNPCLT IAAAAEHVCK 240 DLVNNVLKYK TKTCTNSVSK VVDQNPPIET HDTLKSSETS YVSVKETLRG YIGGMPCTAT 300 LRMKINLQNS NDFDDWNYSI MRKSLLTLKG KVGGYVVFRA IEKDKLHVID GEVKMFEVNY 360 RTPYTQYMHY RLLLAAASGS RYVLEGKKIM NPYLFAIFSR KETTTLYVTF KRVSGNFAED 420 HHVGLNLKGK LKVSMIQLLK TLLSLEGNGK GRFLHLFLLH LLRTYILQIP QGIHKEYTPT 480 DSYNNSYPIS TFHELETGDG CIISCRRWNC GHSRLKFNEE KHPVLLLNGH STESFCLPTE 540 PNDLIRTLLT EGHEIWLLQP RLHPLNPSNN FTIEDLGRYD IPAVISKICE FHGPSMKVHV 600 VAHCVGGLAI HIAVMGGHVS PTRIASLCCT NSSMFFKLST LATVKMWLPL VSISMALLGK 660 NKTLTLLDTS KASLRHRLLM YIARWIPRYE RCTCNECEVF SGIFGNTFWH QNLTPTMHHW 720 LNKQSTTKLP MAAFPHLRKI CKSGFIVDSK GNNSYLIHPE RMAVSTLYIS GGRSLLVTPE 780 TTFLANKYVK LHQPGFRHER VVVDGFGHSD LLIGEESCKE VFPYIVSHIR LCEEGKDIVM 840 INKEKKDGKE ALDWAADPYR VASFSTWSSM SKLRLLGC* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2303 | BetA | 5.0e-11 | 129 | 241 | 117 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 9.0e-15 | 166 | 237 | 72 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN62038.1 | 0 | 1 | 862 | 296 | 1093 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 52 | 862 | 520 | 1329 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI30326.1 | 0 | 355 | 871 | 1 | 521 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002530344.1 | 0 | 1 | 860 | 284 | 1142 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002530345.1 | 0 | 1 | 860 | 231 | 1062 | hypothetical protein RCOM_0293450 [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cnj_A | 0.0001 | 117 | 243 | 370 | 495 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 2gew_A | 0.0001 | 117 | 243 | 372 | 497 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4w_A | 0.0001 | 117 | 243 | 372 | 497 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4v_A | 0.0001 | 117 | 243 | 372 | 497 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| PDB | 1n4u_A | 0.0001 | 117 | 243 | 372 | 497 | A Chain A, Cholesterol Oxidase From Streptomyces Sp. F359w Mutant (0.95a) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV113989 | 240 | 531 | 770 | 0 |
| DV112370 | 237 | 533 | 769 | 0 |
| CF418642 | 220 | 577 | 796 | 0 |
| FD506713 | 248 | 523 | 769 | 0 |
| FD502119 | 238 | 597 | 833 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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