Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.002G244600.1 |
Family | GT47 |
Protein Properties | Length: 542 Molecular Weight: 61380.6 Isoelectric Point: 9.4867 |
Chromosome | Chromosome/Scaffold: 02 Start: 60867000 End: 60871561 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 204 | 485 | 0 |
EKQFKVFVYKEGEPPVFHDGPCKSIYSMEGNFIYQMDVNTKFRTNNPEKAHVFYLPFSVAKMVRFVYLRDSRDFGPIRRTVIDYVNVVSEKYPYWNRSLG ADHFMLACHDWGPEASFSNPYLGKNSIRALCNANTSEKFNPVKDVSIPEMNLRTGKLTGLIGGPSASRRPILAFFAGGVHGPIRPILLEHWEGKDDEIKV HKYLPQGINYYEMMRSSKYCLCPSGYEVASPRIVEALYNGCVPVLISKSYVPPFSDVLRWKSFSVVVSVEDIPRLKEILMKI |
Full Sequence |
---|
Protein Sequence Length: 542 Download |
MSGDRFKNCF LPTPAGSSST AIKLLMITVP LILVSFIIFV LVPRNSSYWV YVSPSGNSST 60 GNFGAVSEEV STAAEAVAVS GEATLNRSTN KSLDVEAQVM EIHEFDETKE ASLNITTNEL 120 NNLNISVTGV PNATISLNES ISLPLKRNRR VRTKLDKLEA GLQRARAAIK DAKNSSQLLD 180 PDYVPIGPMY WDAKAFHRSY MEMEKQFKVF VYKEGEPPVF HDGPCKSIYS MEGNFIYQMD 240 VNTKFRTNNP EKAHVFYLPF SVAKMVRFVY LRDSRDFGPI RRTVIDYVNV VSEKYPYWNR 300 SLGADHFMLA CHDWGPEASF SNPYLGKNSI RALCNANTSE KFNPVKDVSI PEMNLRTGKL 360 TGLIGGPSAS RRPILAFFAG GVHGPIRPIL LEHWEGKDDE IKVHKYLPQG INYYEMMRSS 420 KYCLCPSGYE VASPRIVEAL YNGCVPVLIS KSYVPPFSDV LRWKSFSVVV SVEDIPRLKE 480 ILMKISSRQY IRMQRRVLQV RRHFEFHSPP KRFDVFHMIL HSIWLRRLNV RVSDGNDVMP 540 N* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-67 | 203 | 485 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB08605.1 | 0 | 125 | 534 | 2 | 407 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_001031828.1 | 0 | 117 | 534 | 106 | 517 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002284018.1 | 0 | 203 | 532 | 1 | 330 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326234.1 | 0 | 203 | 530 | 1 | 328 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528630.1 | 0 | 70 | 534 | 107 | 567 | catalytic, putative [Ricinus communis] |