Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G011900.1 |
Family | GH35 |
Protein Properties | Length: 855 Molecular Weight: 94746.3 Isoelectric Point: 6.9318 |
Chromosome | Chromosome/Scaffold: 03 Start: 755171 End: 760889 |
Description | beta-galactosidase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 37 | 339 | 0 |
VINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKAGLYAHLRIGPYVCAEWNFGGFPVWLKF VPGISFRTDNEPFKRAMQGFTEKIVGLMKSHNLFESQGGPIILSQIENEYGAQSKLLGAAGYNYVTWAAKMAVETGTGVPWVMCKEDDAPDPVINTCNGF YCDAFQPNKPYKPTIWTEAWSGWFSDFGGPLHHRPAEDLAFAIARFIQKGGSFVNYYMYHGGTNFGRTAGGPFITTSYDYDAPVDEYGLIRQPKYGHLKE LHK |
Full Sequence |
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Protein Sequence Length: 855 Download |
MEGTSFSKLL LAFCLALFYL SPQLVQTSVT YDKKAIVING QRRILFSGSI HYPRSTPDMW 60 EDLIQKAKDG GLDVIETYVF WNVHEPSPGN YNFEGRYDLV RFIKTVQKAG LYAHLRIGPY 120 VCAEWNFGGF PVWLKFVPGI SFRTDNEPFK RAMQGFTEKI VGLMKSHNLF ESQGGPIILS 180 QIENEYGAQS KLLGAAGYNY VTWAAKMAVE TGTGVPWVMC KEDDAPDPVI NTCNGFYCDA 240 FQPNKPYKPT IWTEAWSGWF SDFGGPLHHR PAEDLAFAIA RFIQKGGSFV NYYMYHGGTN 300 FGRTAGGPFI TTSYDYDAPV DEYGLIRQPK YGHLKELHKA VKMCERALVS ADPVVTSLGN 360 FQQAHTYTSE SGDCAAFLSN YDTESAARVL FNNMHYNLPP WSISILPDCR NVVFNTAKVG 420 VQTSQMQMLP TNTKMLSWET YDEDTSALDD SLMISANGLL EQINVTRDAS DYLWYITSVD 480 IGSSESFLRG GELPTLIVQS TGHAVHIFIN GQLSGSAFGT RENRRFTFTG KVNLRAGTNK 540 IALLSVAVGL PNVGGHFETW NTGILGPVAL HGLDQGKRDL SWQKWTYQVG LKGEAMNLDS 600 PNGILSLEWM EGSLAAQTQQ PLRWHKAYFD APEGDEPLAL DMESMGKGQI WINGQSIGRY 660 WTAYAHGDCS GCSYSGTFRP TKCQLGCGQP TQKWYHVPRS WLKPTQNLLV LFEELGGDPS 720 KISLVKRSVS TVCAEISEYH PNIKNWQIES YGKTEEFHRP KVHLHCSPGQ AISSIKFASF 780 GTPLGTCGSY QQGPCHAPTS YDILEKRCVG KQRCAVTISN SNFGHDPCPN VLKRLSVEAV 840 CAPMTSTTAQ PGGN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 4.0e-5 | 51 | 134 | 85 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 6.0e-21 | 29 | 331 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 5.0e-27 | 764 | 841 | 82 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 8.0e-167 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 25 | 842 | 819 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAW47739.1 | 0 | 1 | 851 | 1 | 849 | beta-galactosidase [Prunus persica] |
DDBJ | BAD91082.1 | 0 | 1 | 851 | 1 | 850 | beta-D-galactosidase [Pyrus pyrifolia] |
EMBL | CAB16852.1 | 0 | 3 | 848 | 4 | 849 | beta-galactosidase like protein [Arabidopsis thaliana] |
RefSeq | XP_002274449.1 | 0 | 1 | 846 | 1 | 845 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310279.1 | 0 | 1 | 843 | 1 | 842 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 24 | 337 | 3 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4.99997e-41 | 29 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4.99997e-41 | 29 | 353 | 11 | 347 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |