y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G034900.3 |
Family | GT5 |
Protein Properties | Length: 653 Molecular Weight: 73551.4 Isoelectric Point: 7.9415 |
Chromosome | Chromosome/Scaffold: 03 Start: 3533121 End: 3542644 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 208 | 604 | 0 |
HVIHICTEMEPLISVGPLAPYITGLSRALQRKGHLVEVILPKYASLDLDEVQGLREIEADSYSFFNGQLHGNRIWTGVVRGIGVTFIQPLYFSSFFNRDG IYDHPDDFERFTYFSRASLDYIAKSGKQPDVLHLHNWETAIVGPLFWDIFAKQGLGNTRILLTCQGFDSQCLDEPDKLALCGLDPDRLHRPDRFQDTAKT HLVNILKGGVVYSNKVIVMSSMHSKGRIIHSMSHGLEPTLTMHKEKLLVAPYGFDNSTWDPSTDKFLPVNYSTENMRGKYACKVAVQQQAGISTHASSIL VGCIISEESGFDLEKLKAVVRNAIREGAQFVFLGNGSVSTTYRALRSFQEAVEDSNVKFFYNYDEALSHLVFAGSDIMLCHSFHDPLLQVPVSSMHY |
Full Sequence |
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Protein Sequence Length: 653 Download |
MSMATLINPA IPSSPSRRFS IPLTNPNSHF VKAPSLLRCV RKNGEINGLS RTPPPMDNGG 60 EDDAETSLEE SSNVELESKN NEIWRLFKEA QQNILYLNKQ RVKAVDELNK AKREKQLLLN 120 KIEQLEKENK RVSGKDNLVV CWELLLRIDS MVLGGMVSTE EASKLRRMVI DSKVSLVDVF 180 SGLLQQRDAE LLAELRLFSE GSKRKGYHVI HICTEMEPLI SVGPLAPYIT GLSRALQRKG 240 HLVEVILPKY ASLDLDEVQG LREIEADSYS FFNGQLHGNR IWTGVVRGIG VTFIQPLYFS 300 SFFNRDGIYD HPDDFERFTY FSRASLDYIA KSGKQPDVLH LHNWETAIVG PLFWDIFAKQ 360 GLGNTRILLT CQGFDSQCLD EPDKLALCGL DPDRLHRPDR FQDTAKTHLV NILKGGVVYS 420 NKVIVMSSMH SKGRIIHSMS HGLEPTLTMH KEKLLVAPYG FDNSTWDPST DKFLPVNYST 480 ENMRGKYACK VAVQQQAGIS THASSILVGC IISEESGFDL EKLKAVVRNA IREGAQFVFL 540 GNGSVSTTYR ALRSFQEAVE DSNVKFFYNY DEALSHLVFA GSDIMLCHSF HDPLLQVPVS 600 SMHYPVMKTK CHLRKYKMLI ITRLAFPFGS KIMWSQSTQP SILTSEHCNR VI* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02939 | PLN02939 | 0.005 | 86 | 126 | 41 | + transferase, transferring glycosyl groups | ||
PRK00654 | glgA | 3.0e-73 | 208 | 586 | 390 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-77 | 208 | 586 | 394 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 3.0e-80 | 208 | 586 | 387 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 6.0e-112 | 97 | 604 | 534 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13787.1 | 0 | 29 | 604 | 31 | 600 | starch synthase V precursor [Lotus japonicus] |
GenBank | ACD13788.1 | 0 | 35 | 607 | 32 | 594 | starch synthase V precursor [Solanum tuberosum] |
GenBank | ACD13789.1 | 0 | 3 | 604 | 1 | 596 | starch synthase V precursor [Vitis vinifera] |
RefSeq | XP_002265333.1 | 0 | 3 | 581 | 1 | 552 | PREDICTED: similar to starch synthase V, partial [Vitis vinifera] |
RefSeq | XP_002310316.1 | 0 | 81 | 604 | 65 | 583 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 5e-17 | 208 | 604 | 11 | 424 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3vue_A | 5e-17 | 208 | 604 | 11 | 424 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 1rzv_B | 0.000000000000002 | 208 | 604 | 2 | 388 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0.000000000000002 | 208 | 604 | 2 | 388 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0.000000000000002 | 208 | 604 | 2 | 388 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT564635 | 285 | 1 | 285 | 0 |
EL455989 | 316 | 176 | 491 | 0 |
EY766100 | 286 | 220 | 505 | 0 |
BF273469 | 285 | 202 | 482 | 0 |
HO805493 | 257 | 153 | 409 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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