| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G041900.1 |
| Family | GH5 |
| Protein Properties | Length: 540 Molecular Weight: 60818.4 Isoelectric Point: 4.8611 |
| Chromosome | Chromosome/Scaffold: 03 Start: 5147737 End: 5152307 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 206 | 514 | 2.10195e-44 |
| ANGYGHNKAKQVLEKHRNTFLNVGDFEFLYRHGINTVRIPVGWWIAYDPDPPAPFIGGTLEALDNAFSWAEDYSIKCIIDLHAAPGSQNGMEHSASRDGT TGWPTSSDYILQTLHVIDFLASRYAKHPAFLGIELLNEPSAAEVPLDMLVSYYKQGYEVVRKYSPSAYVIICQRIGSADPLELYQADIGSHNLVVDLHYY NLFDTFFVNLSAIDNIQFIYKSREAQLQALNGANGPLVFIGEWVNEWNVTSGSQSEYQDFGRAQLEVYNAASFGWAYWTLKNDRKHWDFEWNIRNNYLRL SSSEKKVFN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 540 Download |
| MELVFSKWVF VFSLCCWLIF SVAVAVEGVH GGSKVRGVNL GGWLVIEGWI KPSLFDGIPN 60 GDMLDGTQVQ FKSVTLQKYV SAESGGGMDI SVDRDDAYSW ETFTLWRVSE LEFQFRTTQG 120 QFLTCYGNGC SASATAKSAS STETFQIERN NNGKVHIKIK SGTYLQATMD NQLTADYPGT 180 PGWDDNAATF EMTIVANNLH GDYQLANGYG HNKAKQVLEK HRNTFLNVGD FEFLYRHGIN 240 TVRIPVGWWI AYDPDPPAPF IGGTLEALDN AFSWAEDYSI KCIIDLHAAP GSQNGMEHSA 300 SRDGTTGWPT SSDYILQTLH VIDFLASRYA KHPAFLGIEL LNEPSAAEVP LDMLVSYYKQ 360 GYEVVRKYSP SAYVIICQRI GSADPLELYQ ADIGSHNLVV DLHYYNLFDT FFVNLSAIDN 420 IQFIYKSREA QLQALNGANG PLVFIGEWVN EWNVTSGSQS EYQDFGRAQL EVYNAASFGW 480 AYWTLKNDRK HWDFEWNIRN NYLRLSSSEK KVFNSLRWLL LASICFYQCQ ILELVENWI* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.006 | 115 | 178 | 64 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| cd00257 | Fascin | 4.0e-10 | 67 | 176 | 110 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 1.0e-16 | 238 | 488 | 257 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-23 | 198 | 501 | 334 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI33153.1 | 0 | 1 | 527 | 60 | 585 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002262875.1 | 0 | 1 | 527 | 48 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002310872.1 | 0 | 35 | 524 | 1 | 492 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002438060.1 | 0 | 5 | 524 | 9 | 528 | hypothetical protein SORBIDRAFT_10g007500 [Sorghum bicolor] |
| RefSeq | XP_002533566.1 | 0 | 24 | 532 | 6 | 515 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3n9k_A | 4e-25 | 202 | 495 | 50 | 375 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 3n9k_A | 0.006 | 35 | 69 | 14 | 48 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqp_A | 5e-25 | 202 | 408 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqp_A | 0.005 | 35 | 69 | 9 | 43 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 9e-25 | 202 | 408 | 45 | 252 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
