| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G044000.4 |
| Family | GH5 |
| Protein Properties | Length: 468 Molecular Weight: 51960.9 Isoelectric Point: 5.0238 |
| Chromosome | Chromosome/Scaffold: 03 Start: 5657540 End: 5660498 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 201 | 417 | 8e-38 |
| TNGYGPDKAPQVMQDHWNSYITEEDFNFMSANGLSAVRIPVGWWIAQDPTPPKPFVGGSSIALDNAFTWAEKYGMKVIIDLHAAKASQNGDEHSGARDGF LEWADSNIDETVAVIEFLAARYGVRPNLAAIALMNEPRAPGVTLDALTKYYKAAYDAIRKYTNAYVILSARLGPADPKELFSLASTMNRVAIDVHYYNLF SDSFSGMTVQQNIDFVN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 468 Download |
| MVYLPFLLIF NLISYFPSSS HAQIADLILP LKAVNLGNWL VTEGWMKPSR FDGIINKDLL 60 DGTQVQFLST KLKKYLCAEN GGGTVVVANR PSPSGWETFR LWRVSESCFN LRVFNKQFVG 120 LGSQGVQAVL DTPTDTETFE IVRKDDDRNR VRFKASNGLF LQAQSETLVT ADYAESSWDD 180 SDPSVFIMTI VNTLQGEFQI TNGYGPDKAP QVMQDHWNSY ITEEDFNFMS ANGLSAVRIP 240 VGWWIAQDPT PPKPFVGGSS IALDNAFTWA EKYGMKVIID LHAAKASQNG DEHSGARDGF 300 LEWADSNIDE TVAVIEFLAA RYGVRPNLAA IALMNEPRAP GVTLDALTKY YKAAYDAIRK 360 YTNAYVILSA RLGPADPKEL FSLASTMNRV AIDVHYYNLF SDSFSGMTVQ QNIDFVNNQR 420 ASDLGSLTSA NGPLVLVVVF FLQGNGLQNL LETMHQWKIT RDLLKHS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 3.0e-6 | 63 | 172 | 111 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 3.0e-13 | 216 | 397 | 198 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-28 | 205 | 360 | 158 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN74231.1 | 0 | 25 | 437 | 137 | 547 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18831.1 | 0 | 3 | 437 | 6 | 445 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 1 | 437 | 4 | 445 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33035.1 | 0 | 3 | 437 | 6 | 445 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002306319.1 | 0 | 32 | 437 | 1 | 423 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 6e-27 | 197 | 414 | 45 | 262 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3n9k_A | 8e-27 | 197 | 414 | 50 | 267 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqc_A | 9e-27 | 197 | 414 | 45 | 262 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1cz1_A | 9e-27 | 197 | 414 | 45 | 262 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| PDB | 2pc8_A | 1e-26 | 197 | 414 | 51 | 268 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
