| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G044200.1 |
| Family | GH5 |
| Protein Properties | Length: 507 Molecular Weight: 56905.8 Isoelectric Point: 6.1859 |
| Chromosome | Chromosome/Scaffold: 03 Start: 5682849 End: 5685203 |
| Description | |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 220 | 488 | 2.20004e-42 |
| VMQDHWDSYITEQDFNFMSSNGLDAVRVPVGWWIAQDPNPPRPFVGGSSRALDNAFTWAEKYGMKVIIDLHAVKDSQNGNDHSGTRDGFQEWGDSNIGET VAVIEYLAARYGGRLGLAAIELMNEPLAPGATFDALAKYYRAGYDAVRKHTDAYVILSARLGPADPQEFFSLASSMNRVGIDVHNYNLFSDMFSSMSVQQ NIDYIYNQRASDLGRLISANGPRVFVGEWTGEFGRNDASMEDYKRFARAQLDVYGPATFGWAYWTYKCV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 507 Download |
| MSKGGLNMVY LAFLLFFNLI SCFPSSSHAQ NANLNLPLRA VNLGNWLVTE GWMQPSRFDG 60 IVNKDLLDGT QVQFLSTRLN KYLCAESGGG TIIVANRASA SGWETFRLWR VNASYFNFRV 120 FFKQFVGLGN QGVVQAVLNG PTNSATFEIV RRNGDPNKVR LRASNGLFLQ AQSETRVTAD 180 YRGSSWDDWD PSVFRMTIVN TLQGEYQITN GYGPDRAPQV MQDHWDSYIT EQDFNFMSSN 240 GLDAVRVPVG WWIAQDPNPP RPFVGGSSRA LDNAFTWAEK YGMKVIIDLH AVKDSQNGND 300 HSGTRDGFQE WGDSNIGETV AVIEYLAARY GGRLGLAAIE LMNEPLAPGA TFDALAKYYR 360 AGYDAVRKHT DAYVILSARL GPADPQEFFS LASSMNRVGI DVHNYNLFSD MFSSMSVQQN 420 IDYIYNQRAS DLGRLISANG PRVFVGEWTG EFGRNDASME DYKRFARAQL DVYGPATFGW 480 AYWTYKCVYN HWSLKWMIEN NYINLN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd00257 | Fascin | 0.0002 | 70 | 180 | 112 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 6.0e-13 | 224 | 483 | 271 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 2.0e-23 | 213 | 486 | 310 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN74231.1 | 0 | 36 | 505 | 141 | 607 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI18831.1 | 0 | 16 | 505 | 13 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33033.1 | 0 | 16 | 505 | 13 | 505 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI33035.1 | 0 | 16 | 486 | 13 | 486 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002306319.1 | 0 | 39 | 503 | 1 | 481 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 4e-33 | 205 | 486 | 45 | 360 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 3n9k_A | 4e-33 | 205 | 486 | 50 | 365 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
| PDB | 1eqc_A | 6e-33 | 205 | 486 | 45 | 360 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
