Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G044300.1 |
Family | GH5 |
Protein Properties | Length: 500 Molecular Weight: 56354.7 Isoelectric Point: 6.0207 |
Chromosome | Chromosome/Scaffold: 03 Start: 5686168 End: 5688352 |
Description | |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 212 | 483 | 0 |
MQAHWDSYITEQDFKFISANGLSAVRIPVGWWIAQDPNPPKPFVGGSLKALDNAFTWAEKYGMKVIVDLHAAKASQNRFEHSGARDGFLEWGDSNIDETV AVIEFLATRYGGSPSLGAIELMNEPWAPDVTLDALTKYYKAGYDAIRKHTNAYVILSARLGPADPKELFSFARSLNRVAIDVHWYNLFTDMFITMTVQQN IDYIYDQRSSDLDSWISANGPPILIGEWTGEFGAKKGSLEDYKRYTKAELDVYGGATFGWAYWSYKCEENHW |
Full Sequence |
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Protein Sequence Length: 500 Download |
MVYLAFLLFF NLISCFPPSH AQNTDLKLPL RAVNLGNWLV TEGWMKPSRF DGIINKDLLD 60 GAHVQFLSTK LNKFLCAENG GGTVLVANRI SPSDWETFRL WRVNESYFHL RVLNKQFVGL 120 GNQGVKAVSN TPTHSETFQI ARKDDAPNRV RLKASNGFFL QVQSETLVTA DYTGSSWDDS 180 DPSVFNIAIV NTLQGEYQIT NGYGPVKAPQ VMQAHWDSYI TEQDFKFISA NGLSAVRIPV 240 GWWIAQDPNP PKPFVGGSLK ALDNAFTWAE KYGMKVIVDL HAAKASQNRF EHSGARDGFL 300 EWGDSNIDET VAVIEFLATR YGGSPSLGAI ELMNEPWAPD VTLDALTKYY KAGYDAIRKH 360 TNAYVILSAR LGPADPKELF SFARSLNRVA IDVHWYNLFT DMFITMTVQQ NIDYIYDQRS 420 SDLDSWISAN GPPILIGEWT GEFGAKKGSL EDYKRYTKAE LDVYGGATFG WAYWSYKCEE 480 NHWSLKWMID NNFIQLNMR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00257 | Fascin | 4.0e-5 | 72 | 171 | 100 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
pfam00150 | Cellulase | 5.0e-20 | 212 | 476 | 271 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 1.0e-27 | 213 | 477 | 300 | + Endoglucanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
GO:0030674 | protein binding, bridging |
GO:0051015 | actin filament binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN74231.1 | 0 | 25 | 496 | 138 | 607 | hypothetical protein [Vitis vinifera] |
EMBL | CBI18831.1 | 0 | 3 | 496 | 6 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33033.1 | 0 | 2 | 496 | 5 | 505 | unnamed protein product [Vitis vinifera] |
EMBL | CBI33035.1 | 0 | 5 | 477 | 12 | 486 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002306319.1 | 0 | 31 | 494 | 1 | 481 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1eqp_A | 4e-34 | 196 | 486 | 45 | 370 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
PDB | 3n9k_A | 5e-34 | 196 | 479 | 50 | 367 | A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A |
PDB | 2pc8_A | 7e-34 | 196 | 486 | 51 | 376 | A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A |
PDB | 2pbo_A | 7e-34 | 196 | 486 | 51 | 376 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |