Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G059500.1 |
Family | GH35 |
Protein Properties | Length: 822 Molecular Weight: 91653.2 Isoelectric Point: 7.2369 |
Chromosome | Chromosome/Scaffold: 03 Start: 10296576 End: 10303886 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 38 | 318 | 0 |
TINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPAPGKYYFEGNYDLVKFIKLVKQAGLYVHLRIGPYVCAEWNFGAQMRRFTK MIVNMMKAERLFESQGGPIILSQIENEYGPVEYEIGEPGKAYTDWAAKMAVRLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKPKMWTEAWTG WFTEFGGAVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHR |
Full Sequence |
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Protein Sequence Length: 822 Download |
MDSNSKFPVM WNYWLVVLLA SWVCSVSSTV SYDSKAITIN GQRRILISGS IHYPRSSPEM 60 WPDLIQKAKE GGLDVIQTYV FWNGHEPAPG KYYFEGNYDL VKFIKLVKQA GLYVHLRIGP 120 YVCAEWNFGA QMRRFTKMIV NMMKAERLFE SQGGPIILSQ IENEYGPVEY EIGEPGKAYT 180 DWAAKMAVRL GTGVPWVMCK QDDAPDPIIN TCNGFYCDYF SPNKAYKPKM WTEAWTGWFT 240 EFGGAVPYRP AEDMAFSVAR FIQKGGSFIN YYMYHGGTNF GRTAGGPFIA TSYDYDAPLD 300 EYGLLRQPKW GHLKDLHRAI KLCESALVSG DPTVMQLGVH QEAHVFNYKS GGCAAFLANY 360 DPKSFAKVAF RDMHYNLPPW SISILPDCKN TVYNTARVGA QIARKKMVPV PLHGGFSWQA 420 YNEETASDAD SSFTMVGLLE QINTTRDSTD YLWYTTDIEI DPNEEFFRNG KSPILTILSA 480 GHALHVFVNG QLSGSSYGSL EFPKLTFSQG VNMRAGINKI ALLSIAVGLP NVGPHFETWN 540 AGVLGPVTLN GLNEGRRDLS WQKWSYKIGL KGEALNLHSL SGSSSVEWAE GSLVAQRQPL 600 TWYKTTFNAP AGNAPLALDM RSMGKGQIWI NGQSIGRHWP AYKASGNCSV CNYAGTYDEN 660 KCRTNCEEAS QRWYHVPRSW LNPTGNLLVV IEEWGGDPNA ISLVRRETDS VCADIYEWQP 720 TLMNYQMHAS GKADKPLRPK VHLECDMGQK ISAVKFVSFG TPEGVCGSYR EGSCHAYHSY 780 DAFNRLCVGQ NFCSVTVAPE MFGGDPCPNV MKKLSVEVIC S* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.0001 | 52 | 166 | 143 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 1.0e-18 | 743 | 820 | 82 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-20 | 30 | 310 | 351 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 6.0e-146 | 36 | 320 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 13 | 821 | 832 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK96254.1 | 0 | 23 | 821 | 26 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
GenBank | ABV32545.1 | 0 | 9 | 821 | 6 | 841 | beta-galactosidase protein 2 [Prunus persica] |
RefSeq | XP_002327432.1 | 0 | 23 | 821 | 19 | 839 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329051.1 | 0 | 15 | 821 | 10 | 830 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527409.1 | 0 | 15 | 821 | 17 | 845 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 5e-39 | 29 | 316 | 7 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 3e-33 | 30 | 390 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 3e-33 | 30 | 390 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |