| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G059500.2 |
| Family | GH35 |
| Protein Properties | Length: 696 Molecular Weight: 77277.7 Isoelectric Point: 7.0646 |
| Chromosome | Chromosome/Scaffold: 03 Start: 10296576 End: 10301457 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 3 | 192 | 0 |
| KAQMRRFTKMIVNMMKAERLFESQGGPIILSQIENEYGPVEYEIGEPGKAYTDWAAKMAVRLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKP KMWTEAWTGWFTEFGGAVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHR | |||
| Full Sequence |
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| Protein Sequence Length: 696 Download |
| MMKAQMRRFT KMIVNMMKAE RLFESQGGPI ILSQIENEYG PVEYEIGEPG KAYTDWAAKM 60 AVRLGTGVPW VMCKQDDAPD PIINTCNGFY CDYFSPNKAY KPKMWTEAWT GWFTEFGGAV 120 PYRPAEDMAF SVARFIQKGG SFINYYMYHG GTNFGRTAGG PFIATSYDYD APLDEYGLLR 180 QPKWGHLKDL HRAIKLCESA LVSGDPTVMQ LGVHQEAHVF NYKSGGCAAF LANYDPKSFA 240 KVAFRDMHYN LPPWSISILP DCKNTVYNTA RVGAQIARKK MVPVPLHGGF SWQAYNEETA 300 SDADSSFTMV GLLEQINTTR DSTDYLWYTT DIEIDPNEEF FRNGKSPILT ILSAGHALHV 360 FVNGQLSGSS YGSLEFPKLT FSQGVNMRAG INKIALLSIA VGLPNVGPHF ETWNAGVLGP 420 VTLNGLNEGR RDLSWQKWSY KIGLKGEALN LHSLSGSSSV EWAEGSLVAQ RQPLTWYKTT 480 FNAPAGNAPL ALDMRSMGKG QIWINGQSIG RHWPAYKASG NCSVCNYAGT YDENKCRTNC 540 EEASQRWYHV PRSWLNPTGN LLVVIEEWGG DPNAISLVRR ETDSVCADIY EWQPTLMNYQ 600 MHASGKADKP LRPKVHLECD MGQKISAVKF VSFGTPEGVC GSYREGSCHA YHSYDAFNRL 660 CVGQNFCSVT VAPEMFGGDP CPNVMKKLSV EVICS* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.001 | 12 | 184 | 229 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 1.0e-18 | 617 | 694 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-80 | 3 | 194 | 207 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 3 | 695 | 694 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 2 | 695 | 153 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| EMBL | CAC44500.1 | 0 | 2 | 695 | 150 | 843 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 2 | 695 | 146 | 839 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329051.1 | 0 | 4 | 695 | 139 | 830 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527409.1 | 0 | 2 | 695 | 152 | 845 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.000000000000003 | 25 | 190 | 149 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000000007 | 27 | 177 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.003 | 322 | 582 | 382 | 586 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.000000007 | 27 | 177 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO780602 | 588 | 2 | 580 | 0 |
| HO778160 | 581 | 2 | 580 | 0 |
| HO795552 | 496 | 2 | 496 | 0 |
| HO784793 | 322 | 18 | 339 | 0 |
| GW868956 | 315 | 277 | 591 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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