| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G059500.3 |
| Family | GH35 |
| Protein Properties | Length: 547 Molecular Weight: 60691.8 Isoelectric Point: 7.5099 |
| Chromosome | Chromosome/Scaffold: 03 Start: 10296576 End: 10301457 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 3 | 192 | 0 |
| KAQMRRFTKMIVNMMKAERLFESQGGPIILSQIENEYGPVEYEIGEPGKAYTDWAAKMAVRLGTGVPWVMCKQDDAPDPIINTCNGFYCDYFSPNKAYKP KMWTEAWTGWFTEFGGAVPYRPAEDMAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLLRQPKWGHLKDLHR | |||
| Full Sequence |
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| Protein Sequence Length: 547 Download |
| MMKAQMRRFT KMIVNMMKAE RLFESQGGPI ILSQIENEYG PVEYEIGEPG KAYTDWAAKM 60 AVRLGTGVPW VMCKQDDAPD PIINTCNGFY CDYFSPNKAY KPKMWTEAWT GWFTEFGGAV 120 PYRPAEDMAF SVARFIQKGG SFINYYMYHG GTNFGRTAGG PFIATSYDYD APLDEYGLLR 180 QPKWGHLKDL HRAIKLCESA LVSGDPTVMQ LGVHQEAHVF NYKSGGCAAF LANYDPKSFA 240 KVAFRDMHYN LPPWSISILP DCKNTVYNTA RVGAQIARKK MVPVPLHGGF SWQAYNEETA 300 SDADSSFTMV GLLEQINTTR DSTDYLWYTT DIEIDPNEEF FRNGKSPILT ILSAGHALHV 360 FVNGQLSGSS YGSLEFPKLT FSQGVNMRAG INKIALLSIA VGLPNVGPHF ETWNAGVLGP 420 VTLNGLNEGR RDLSWQKWSY KIGLKGEALN LHSLSGSSSV EWAEGSLVAQ RQPLTWYKTT 480 FNAPAGNAPL ALDMRSMGKG QIWINGQSIG RHWPAYKASG NCSVCNYAGT YDENKCRTNC 540 EEASQR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 0.001 | 12 | 184 | 215 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-81 | 3 | 194 | 207 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 3 | 546 | 545 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 2 | 546 | 153 | 697 | unknown [Populus trichocarpa x Populus deltoides] |
| GenBank | ABV32545.1 | 0 | 2 | 546 | 148 | 692 | beta-galactosidase protein 2 [Prunus persica] |
| EMBL | CAC44500.1 | 0 | 2 | 546 | 150 | 694 | beta-galactosidase [Fragaria x ananassa] |
| RefSeq | XP_002327432.1 | 0 | 2 | 546 | 146 | 690 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002329051.1 | 0 | 4 | 546 | 139 | 681 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0.000000000000002 | 25 | 190 | 149 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.000000004 | 27 | 177 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 0.000000004 | 27 | 177 | 145 | 313 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO780602 | 533 | 2 | 533 | 0 |
| HO795552 | 496 | 2 | 496 | 0 |
| HO778160 | 547 | 2 | 546 | 0 |
| HO784793 | 322 | 18 | 339 | 0 |
| CO129908 | 290 | 257 | 546 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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