| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G067900.1 |
| Family | CE8 |
| Protein Properties | Length: 539 Molecular Weight: 60050.8 Isoelectric Point: 8.3314 |
| Chromosome | Chromosome/Scaffold: 03 Start: 14188072 End: 14192905 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 226 | 530 | 0 |
| DVTVCKNHRKCYKTVQEAVDAAPKNKKGRDQYVIKIRKGVYEETVRVPFEKKNVVFLGEGMGKTIITGALNVHQPGMNTYNSATVGVLGDGFMASGLTIR NTAGSDAHQAVAFRSDSDHSVIENCEFLGNQDTLYAQSLRQFYKNCRIQGNVDFIFGNSASVFQDCEILVGPRQTNPESSENNAVTAHGRTDPAQSTGLV FHNCVINGTEEYMRYYKKNPEVHKNYLGRPWKEYSRTIFINCKLEKIISPDGWMPWSGDVGLKTVFYGEFRNSGPGSDVSKRVPWSTQIPSQNVPTYSVQ NFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 539 Download |
| MSIVHIFLPV SLVIFLAIFS SAHHDHEKST PSQMYHACQA TRFPELCETS LTQLSHLPPN 60 TTSLQIIQST ISVSDHNLKT GQSMVKSVLD TSKGNLNRTN IATICLDILS YSSYRIKSAH 120 YALTHGNIKD ARAWMSAALG YQQNCWGALK YVNDTKLVVD TMLFLDSLVH HSSNALSMMV 180 AYDNYGEDTT VWTPPKTERD GFYEKGSGGK LELRFNGGFP SNLKVDVTVC KNHRKCYKTV 240 QEAVDAAPKN KKGRDQYVIK IRKGVYEETV RVPFEKKNVV FLGEGMGKTI ITGALNVHQP 300 GMNTYNSATV GVLGDGFMAS GLTIRNTAGS DAHQAVAFRS DSDHSVIENC EFLGNQDTLY 360 AQSLRQFYKN CRIQGNVDFI FGNSASVFQD CEILVGPRQT NPESSENNAV TAHGRTDPAQ 420 STGLVFHNCV INGTEEYMRY YKKNPEVHKN YLGRPWKEYS RTIFINCKLE KIISPDGWMP 480 WSGDVGLKTV FYGEFRNSGP GSDVSKRVPW STQIPSQNVP TYSVQNFIQG DQWIPKSH* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 2.0e-103 | 38 | 534 | 533 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 8.0e-111 | 1 | 534 | 565 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 7.0e-112 | 1 | 537 | 574 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-150 | 226 | 531 | 309 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 1 | 538 | 554 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_196538.1 | 0 | 29 | 537 | 40 | 550 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002281640.1 | 0 | 29 | 537 | 46 | 554 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 29 | 537 | 48 | 557 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309906.1 | 0 | 29 | 537 | 51 | 563 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002517239.1 | 0 | 29 | 537 | 41 | 551 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 221 | 534 | 3 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 226 | 534 | 4 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-21 | 227 | 535 | 8 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-21 | 227 | 535 | 8 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-21 | 227 | 535 | 8 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
