| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.003G071200.1 |
| Family | GT31 |
| Protein Properties | Length: 677 Molecular Weight: 77408.1 Isoelectric Point: 8.5553 |
| Chromosome | Chromosome/Scaffold: 03 Start: 16506882 End: 16510848 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 443 | 625 | 0 |
| ERMAVRKSWMQHKLVKSSHVVARFFVAMHARKEVNVELKREAEFFADIVIVPYMDNYDLVVLKTVAICEYGGRVAAAKYIMKSDDDTFVRVDAVINEAKK VHPDRSFYIGNINYYHRPLRAGKWAVTYEEWAEEVYPPYANGPGYIMSSDIAHFIVSEFEKHNLSLFKMEDVSMGMWVEKFNS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 677 Download |
| MKKSKLLKLD RLDRFDMFIS LAKQRSVQIL FIVGFLYLVL VTVEIPFVFR TRLNTLSQEP 60 LTRVPRLASE VEFQYKEAPS RPLNWVSENA PTPIQFQHQK QLKPQSTILS RLSFDAESFD 120 PTAKDGSLEL HKSAKVAWEV GRKLWEELES GDVKIGSINK PKKPKNESEL CRPSVSLSES 180 EFLAHGKVMV LPCGLTLGSH ITVVGKPRAA HAETNPRIAL LKSGEDSVMV SQFMMELQGL 240 KTVDGEDPPR ILHFNPRLKG DWSRKPVIEQ NTCYRMQWGT AMRCEGWKSK ADDETVDGQV 300 KCEKWIRDDN DHSVESNATW WLKRLIGRTK KVTVDWPFPF TEGKLFVLTL SAGLEGYHVS 360 VDGRHITSFP YRTGYTLEDA TGLMLNGDVD VHSIFAASLP TSHPSFAPQR HLEMSNRWKA 420 PPLPEQPVDL FIGVLSAGNH FAERMAVRKS WMQHKLVKSS HVVARFFVAM HARKEVNVEL 480 KREAEFFADI VIVPYMDNYD LVVLKTVAIC EYGGRVAAAK YIMKSDDDTF VRVDAVINEA 540 KKVHPDRSFY IGNINYYHRP LRAGKWAVTY EEWAEEVYPP YANGPGYIMS SDIAHFIVSE 600 FEKHNLSLFK MEDVSMGMWV EKFNSSKAVD YIHSLKFCQF GCIEGYYTAH YQSPRQMMCM 660 WDKLQKQTRP QCCNMR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 2.0e-16 | 192 | 394 | 203 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 2.0e-20 | 191 | 395 | 205 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam01762 | Galactosyl_T | 3.0e-24 | 442 | 622 | 189 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| pfam00337 | Gal-bind_lectin | 4.0e-25 | 188 | 394 | 207 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 1.0e-134 | 31 | 676 | 676 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95149.1 | 0 | 38 | 676 | 1 | 642 | unknown [Populus trichocarpa] |
| DDBJ | BAA97209.1 | 0 | 1 | 676 | 1 | 681 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_201068.1 | 0 | 1 | 676 | 1 | 681 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002322135.1 | 0 | 14 | 676 | 9 | 674 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511491.1 | 0 | 1 | 676 | 1 | 670 | galactosyltransferase, putative [Ricinus communis] |
