y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G088100.1 |
Family | GH1 |
Protein Properties | Length: 490 Molecular Weight: 55809.6 Isoelectric Point: 5.4998 |
Chromosome | Chromosome/Scaffold: 03 Start: 23914082 End: 23934725 |
Description | beta glucosidase 42 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 18 | 479 | 0 |
KADFPPNFVFGVATAAYQIEGACNEGSRGASIWDSFSHTEGKIIDGSSGDVAVDHYHRYKEDVNLIHKFGFDAYRFSISWSRIFPDGVGTKVNEEGIAFY NNLINALIEKGIQPFITLYHWDLPLHLQETIGGWLDKQIVNYFAIYADTCFAHFGDRVKNWITINEPLQTAVNGYDTGIFAPGRREGSSEEPYLAAHHQI LAHATAGSIYRSKYKDKQGGQIGLVLDCEWAEANSDKIEDKSAASRRLDFQLGWYLCPLYYGDYPAVMLERLGDRLPKFSEEEKKLLLNSLDFLGLNHYT SRFISHATSCSEESYFYKAQEMERIVEWEGGEKIGEKAASEWLYIVPWGLRKVLNYIARKYNNPPIYITENGMDDEEDNSLPLSEILDDKLRVHYFKGYL AAVAQAIKDGADVRGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNSLTRHPKSSAYWFSRFLK |
Full Sequence |
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Protein Sequence Length: 490 Download |
MAKKELFKEN GEGEEVCKAD FPPNFVFGVA TAAYQIEGAC NEGSRGASIW DSFSHTEGKI 60 IDGSSGDVAV DHYHRYKEDV NLIHKFGFDA YRFSISWSRI FPDGVGTKVN EEGIAFYNNL 120 INALIEKGIQ PFITLYHWDL PLHLQETIGG WLDKQIVNYF AIYADTCFAH FGDRVKNWIT 180 INEPLQTAVN GYDTGIFAPG RREGSSEEPY LAAHHQILAH ATAGSIYRSK YKDKQGGQIG 240 LVLDCEWAEA NSDKIEDKSA ASRRLDFQLG WYLCPLYYGD YPAVMLERLG DRLPKFSEEE 300 KKLLLNSLDF LGLNHYTSRF ISHATSCSEE SYFYKAQEME RIVEWEGGEK IGEKAASEWL 360 YIVPWGLRKV LNYIARKYNN PPIYITENGM DDEEDNSLPL SEILDDKLRV HYFKGYLAAV 420 AQAIKDGADV RGYFAWSLLD NFEWAQGYTK RFGLVYVDYK NSLTRHPKSS AYWFSRFLKG 480 GEKKNGKEN* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 1.0e-123 | 18 | 478 | 472 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 2.0e-125 | 18 | 478 | 478 | + beta-glucosidase | ||
COG2723 | BglB | 6.0e-138 | 21 | 474 | 462 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-179 | 22 | 474 | 455 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 0 | 21 | 477 | 462 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAP51059.1 | 0 | 1 | 488 | 1 | 489 | latex cyanogenic beta glucosidase [Hevea brasiliensis] |
GenBank | ABW76289.1 | 0 | 1 | 489 | 2 | 493 | beta-glucosidase G4 [Medicago truncatula] |
RefSeq | NP_198505.2 | 0 | 18 | 488 | 18 | 489 | BGLU42 (BETA GLUCOSIDASE 42); beta-glucosidase/ catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270406.1 | 0 | 16 | 488 | 555 | 1026 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514775.1 | 0 | 2 | 488 | 4 | 499 | beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3gnr_A | 0 | 12 | 479 | 8 | 487 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
PDB | 3gnp_A | 0 | 12 | 479 | 8 | 487 | A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A |
PDB | 3gno_A | 0 | 12 | 479 | 8 | 487 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_B | 0 | 16 | 479 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
PDB | 2rgm_A | 0 | 16 | 479 | 15 | 480 | A Chain A, Crystal Structure Of A Rice Os3bglu6 Beta-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GR709768 | 278 | 1 | 278 | 0 |
CO129960 | 280 | 199 | 478 | 0 |
CO112186 | 269 | 188 | 456 | 0 |
FP028268 | 296 | 64 | 359 | 0 |
HE645214 | 348 | 38 | 378 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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