Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.003G101000.1 |
Family | CBM43 |
Protein Properties | Length: 199 Molecular Weight: 20164.5 Isoelectric Point: 6.447 |
Chromosome | Chromosome/Scaffold: 03 Start: 30993161 End: 30996105 |
Description | glucan endo-1,3-beta-glucosidase-like protein 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 22 | 103 | 8.1e-34 |
WCICKDGVSDTVLQKTLDYACGAGADCNPIHLKGSCFNPDTVKAHCSYAVNSYFQRKGQAQGTCDFSGTATVTTADPSYTGC |
Full Sequence |
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Protein Sequence Length: 199 Download |
MAALVLPLLI LAAITGRSSG NWCICKDGVS DTVLQKTLDY ACGAGADCNP IHLKGSCFNP 60 DTVKAHCSYA VNSYFQRKGQ AQGTCDFSGT ATVTTADPSY TGCAFPSSAS TAGTTTTPTT 120 TPSSTTPSSV NPINNTPTST TPFGSTTPTG ILGGVGNGLG PSGTGINPDY STDGGFRLQY 180 CFSSYATLLI SGLMLLWG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-20 | 22 | 92 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-38 | 22 | 105 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM64809.1 | 0 | 14 | 196 | 13 | 194 | unknown [Arabidopsis thaliana] |
GenBank | ABK93473.1 | 0 | 15 | 195 | 14 | 211 | unknown [Populus trichocarpa] |
RefSeq | NP_196417.1 | 0 | 14 | 196 | 13 | 194 | E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002284112.1 | 0 | 1 | 198 | 1 | 207 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002514663.1 | 0 | 1 | 198 | 1 | 215 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-27 | 15 | 107 | 6 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |