Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.004G016000.1 |
Family | AA1 |
Protein Properties | Length: 422 Molecular Weight: 47441 Isoelectric Point: 9.2174 |
Chromosome | Chromosome/Scaffold: 04 Start: 1150720 End: 1152058 |
Description | SKU5 similar 11 |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 2 | 377 | 0 |
HKASGGFGGLHVNSRLLIPVPYPDPADDYTLLVGDFFNKGHKSLKKILDSGRNLGRCDGVHLNGKVAKGDGKDEPLFTMEAGKTYKYRICNVGLKTAINV RFQNHQMKLVEMEGSHPMQNEYKSLDVHVGQCSAVLVKADQDPEDYHVVASTRFTRRQVTATGIIRYKNGKGPASSELPPPPVGWAWSLNQFRTFRWNLT ASAARPNPQGSYKYGAINITRTIKLANTAGEVDGKLRYALHGVSHDNEFKTPLKLAEYFNIVKKEFEYDTIPDNPPEKTETIQVKPIVLNITHRHFVEII FENHKTAIQSYHLSGYSFAVAIETGTWSPEKRKNNYNLLDAVSRHTIQVFPKSWAAILLTFDNCGMWNIRSEVWDR |
Full Sequence |
---|
Protein Sequence Length: 422 Download |
MHKASGGFGG LHVNSRLLIP VPYPDPADDY TLLVGDFFNK GHKSLKKILD SGRNLGRCDG 60 VHLNGKVAKG DGKDEPLFTM EAGKTYKYRI CNVGLKTAIN VRFQNHQMKL VEMEGSHPMQ 120 NEYKSLDVHV GQCSAVLVKA DQDPEDYHVV ASTRFTRRQV TATGIIRYKN GKGPASSELP 180 PPPVGWAWSL NQFRTFRWNL TASAARPNPQ GSYKYGAINI TRTIKLANTA GEVDGKLRYA 240 LHGVSHDNEF KTPLKLAEYF NIVKKEFEYD TIPDNPPEKT ETIQVKPIVL NITHRHFVEI 300 IFENHKTAIQ SYHLSGYSFA VAIETGTWSP EKRKNNYNLL DAVSRHTIQV FPKSWAAILL 360 TFDNCGMWNI RSEVWDRFYL GQQLYVSVLS PNLSTKDEYN IPEDAQLCGD VIGLPKPKPY 420 T* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 4.0e-126 | 1 | 411 | 424 | + copper ion binding / pectinesterase | ||
PLN02792 | PLN02792 | 7.0e-136 | 1 | 409 | 412 | + oxidoreductase | ||
PLN02991 | PLN02991 | 1.0e-146 | 2 | 419 | 421 | + oxidoreductase | ||
PLN02835 | PLN02835 | 2.0e-159 | 1 | 413 | 415 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 1 | 421 | 423 | + copper ion binding / oxidoreductase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA47177.1 | 0 | 1 | 420 | 132 | 552 | Bplo [Brassica napus] |
RefSeq | NP_175953.1 | 0 | 1 | 420 | 133 | 552 | sks12 (SKU5 Similar 12); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_187947.1 | 0 | 1 | 420 | 132 | 551 | sks11 (SKU5 Similar 11); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002523381.1 | 0 | 1 | 421 | 131 | 550 | multicopper oxidase, putative [Ricinus communis] |
RefSeq | XP_002523382.1 | 0 | 1 | 421 | 131 | 550 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 4e-23 | 1 | 409 | 109 | 539 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asq_A | 4e-23 | 1 | 409 | 109 | 539 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asp_B | 4e-23 | 1 | 409 | 109 | 539 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1asp_A | 4e-23 | 1 | 409 | 109 | 539 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
PDB | 1aso_B | 4e-23 | 1 | 409 | 109 | 539 | A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
CO123008 | 298 | 63 | 359 | 0 |
CO131548 | 288 | 12 | 299 | 0 |
CO112601 | 278 | 1 | 278 | 0 |
CO132404 | 274 | 1 | 274 | 0 |
CO118359 | 274 | 1 | 274 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|