y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G033500.1 |
Family | GH14 |
Protein Properties | Length: 542 Molecular Weight: 61906.4 Isoelectric Point: 9.3201 |
Chromosome | Chromosome/Scaffold: 04 Start: 2738338 End: 2744508 |
Description | beta-amylase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 101 | 530 | 0 |
FVMMPVDIFTLDASGCPRIRKLKALTVSLKALKLAGVHGIGVEVWWGIVERFSPFDYDWSLYEELFKLISDSGLKLHVALSFHSNIHSTHGKGGVSLPLW ILEIGDVNKDIYYRDQQGFSNNDYLTLGVDHVPLLSGRTALQCYEDFMLSFVNKFESFIGTVIEEISIGLGPSGELRYPAHPFGDGRWKFPGIGEFQCYD KYIFACRMEDLKMAACREGKPQWGDKGPQNAGCYNSLPSGVPFFEEGKESFLSDYGRFFLEWYSGRLICHADAILAKAAKILKKYQENEQTSVMLVAKIS GIYWWYQTVSHPAELTAGYYNTALRDGYDPVVSVLSRHGAALHIPCLEMMDSETPPTYLCSPEGLLKQMQSVSKKRIVNLIGRNTTERLDKTGLWKIRSN CYNPQAEVVRSFTYFRMNDSIFRVENWNNF |
Full Sequence |
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Protein Sequence Length: 542 Download |
MMSTRETREI DEKKKKKKKM ACKCGGYYYT LNAKASFDRD LAKTRKFLLR NVSVIRMFTS 60 GFFRSKWRSI AGKRRILSMD AREKSRSTIL ESSKDKRVPI FVMMPVDIFT LDASGCPRIR 120 KLKALTVSLK ALKLAGVHGI GVEVWWGIVE RFSPFDYDWS LYEELFKLIS DSGLKLHVAL 180 SFHSNIHSTH GKGGVSLPLW ILEIGDVNKD IYYRDQQGFS NNDYLTLGVD HVPLLSGRTA 240 LQCYEDFMLS FVNKFESFIG TVIEEISIGL GPSGELRYPA HPFGDGRWKF PGIGEFQCYD 300 KYIFACRMED LKMAACREGK PQWGDKGPQN AGCYNSLPSG VPFFEEGKES FLSDYGRFFL 360 EWYSGRLICH ADAILAKAAK ILKKYQENEQ TSVMLVAKIS GIYWWYQTVS HPAELTAGYY 420 NTALRDGYDP VVSVLSRHGA ALHIPCLEMM DSETPPTYLC SPEGLLKQMQ SVSKKRIVNL 480 IGRNTTERLD KTGLWKIRSN CYNPQAEVVR SFTYFRMNDS IFRVENWNNF VPFVRMMSTD 540 L* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-99 | 98 | 537 | 447 | + beta-amylase | ||
PLN02801 | PLN02801 | 3.0e-130 | 98 | 541 | 452 | + beta-amylase | ||
PLN00197 | PLN00197 | 4.0e-134 | 68 | 537 | 477 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 5.0e-143 | 92 | 538 | 447 | + beta-amylase | ||
PLN02161 | PLN02161 | 0 | 20 | 541 | 529 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK76508.1 | 0 | 54 | 541 | 1 | 484 | putative beta-amylase [Arabidopsis thaliana] |
DDBJ | BAH20280.1 | 0 | 42 | 541 | 3 | 498 | AT5G55700 [Arabidopsis thaliana] |
RefSeq | NP_567523.1 | 0 | 92 | 537 | 80 | 510 | CT-BMY (CHLOROPLAST BETA-AMYLASE); beta-amylase [Arabidopsis thaliana] |
RefSeq | NP_568829.2 | 0 | 20 | 541 | 7 | 531 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002265698.1 | 0 | 20 | 541 | 7 | 522 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 94 | 541 | 2 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1fa2_A | 0 | 98 | 541 | 13 | 447 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1uko_D | 0 | 98 | 540 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 98 | 540 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 98 | 540 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT743582 | 287 | 251 | 537 | 0 |
DW497216 | 217 | 326 | 542 | 0 |
DW497214 | 217 | 326 | 542 | 0 |
EX314375 | 278 | 199 | 476 | 0 |
EV096717 | 266 | 105 | 359 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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