y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G033500.3 |
Family | GH14 |
Protein Properties | Length: 447 Molecular Weight: 50408 Isoelectric Point: 8.2351 |
Chromosome | Chromosome/Scaffold: 04 Start: 2738908 End: 2743053 |
Description | beta-amylase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 82 | 445 | 0 |
FVMMPVDIFTLDASGCPRIRKLKALTVSLKALKLAGVHGIGVEVWWGIVERFSPFDYDWSLYEELFKLISDSGLKLHVALSFHSNIHSTHGKGGVSLPLW ILEIGDVNKDIYYRDQQGFSNNDYLTLGVDHVPLLSGRTALQCYEDFMLSFVNKFESFIGTVIEEISIGLGPSGELRYPAHPFGDGRWKFPGIGEFQCYD KYMMEDLKMAACREGKPQWGDKGPQNAGCYNSLPSGVPFFEEGKESFLSDYGRFFLEWYSGRLICHADAILAKAAKILKKYQENEQTSVMLVAKISGIYW WYQTVSHPAELTAGYYNTALRDGYDPVVSVLSRHGAALHIPCLEMMDSETPPTYLCSPEGLLKQ |
Full Sequence |
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Protein Sequence Length: 447 Download |
MACKCGGYYY TLNAKASFDR DLAKTRKFLL RNVSVIRMFT SGFFRSKWRS IAGKRRILSM 60 DAREKSRSTI LESSKDKRVP IFVMMPVDIF TLDASGCPRI RKLKALTVSL KALKLAGVHG 120 IGVEVWWGIV ERFSPFDYDW SLYEELFKLI SDSGLKLHVA LSFHSNIHST HGKGGVSLPL 180 WILEIGDVNK DIYYRDQQGF SNNDYLTLGV DHVPLLSGRT ALQCYEDFML SFVNKFESFI 240 GTVIEEISIG LGPSGELRYP AHPFGDGRWK FPGIGEFQCY DKYMMEDLKM AACREGKPQW 300 GDKGPQNAGC YNSLPSGVPF FEEGKESFLS DYGRFFLEWY SGRLICHADA ILAKAAKILK 360 KYQENEQTSV MLVAKISGIY WWYQTVSHPA ELTAGYYNTA LRDGYDPVVS VLSRHGAALH 420 IPCLEMMDSE TPPTYLCSPE GLLKQA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 4.0e-97 | 79 | 445 | 371 | + beta-amylase | ||
PLN02801 | PLN02801 | 1.0e-121 | 79 | 446 | 369 | + beta-amylase | ||
PLN00197 | PLN00197 | 4.0e-125 | 49 | 445 | 399 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 3.0e-128 | 73 | 445 | 373 | + beta-amylase | ||
PLN02161 | PLN02161 | 0 | 1 | 445 | 452 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK76508.1 | 0 | 35 | 445 | 1 | 411 | putative beta-amylase [Arabidopsis thaliana] |
DDBJ | BAH20280.1 | 0 | 23 | 445 | 3 | 425 | AT5G55700 [Arabidopsis thaliana] |
RefSeq | NP_568829.2 | 0 | 1 | 445 | 7 | 458 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_001768786.1 | 0 | 78 | 445 | 35 | 391 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002265698.1 | 0 | 1 | 445 | 7 | 449 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1b1y_A | 0 | 75 | 445 | 2 | 359 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6d_A | 0 | 79 | 446 | 12 | 366 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
PDB | 1uko_D | 0 | 79 | 446 | 12 | 366 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 79 | 446 | 12 | 366 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 79 | 446 | 12 | 366 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EV096717 | 262 | 86 | 336 | 0 |
EX314375 | 266 | 180 | 445 | 0 |
GO368294 | 292 | 114 | 404 | 0 |
DR912923 | 196 | 60 | 255 | 0 |
DR912923 | 91 | 259 | 349 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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