| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G058300.2 |
| Family | GT1 |
| Protein Properties | Length: 632 Molecular Weight: 69058.7 Isoelectric Point: 5.9923 |
| Chromosome | Chromosome/Scaffold: 04 Start: 5580306 End: 5592260 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 196 | 601 | 0 |
| TRGDVQPFIAIGKRLQDYGHRVRLATHSNFKDFVLTAGLEFYPLGGDPKVLAGYMVKNKGFLPSGPSEIPIQRNQIKEIIYSLLPACKDPDPDSAIPFKA DAIIANPPAYGHTHVAEALKVPIHIFFTMPWTPTSEFPHPLSRVKQPAGYRLSYQIVDSMIWLGIRDMINDLRKKKLRLRPVTYLSGSQGSDSDVPYGYI WSPHLVPKPKDWGPKIDVVGFCFLDLATNYEPPESLVKWLEAGPKPIYIGFGSLPVQEPEKMTQIIVDALEQTGQRGIINKGWGGLGSLAESKDSVYLLD NVPHDWLFLQCMAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGDRVHARGVGPAPIPIDEFSLPKLIDAIKFMLNPEVKEKAVELAKAMENEDGVSG AVKAFF | |||
| Full Sequence |
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| Protein Sequence Length: 632 Download |
| MVPSPEHRRN SSSASSSSSS VEIPVKSEQE ICIDAKQMDS SRDSLEAASG DDSRAGVDRS 60 AMNNGGAESS GTIHRSYSEV GTSPVGISNI EKLDSSQRKL EIPKSEAQRH RNILAEEAAQ 120 IFDNNIPAQQ KLNLLNRIAT LKDDGTVEFE VPGDVEPHAL GGGQRDVYTG VAEEESLETE 180 LQYIPPLQIV MLIVGTRGDV QPFIAIGKRL QDYGHRVRLA THSNFKDFVL TAGLEFYPLG 240 GDPKVLAGYM VKNKGFLPSG PSEIPIQRNQ IKEIIYSLLP ACKDPDPDSA IPFKADAIIA 300 NPPAYGHTHV AEALKVPIHI FFTMPWTPTS EFPHPLSRVK QPAGYRLSYQ IVDSMIWLGI 360 RDMINDLRKK KLRLRPVTYL SGSQGSDSDV PYGYIWSPHL VPKPKDWGPK IDVVGFCFLD 420 LATNYEPPES LVKWLEAGPK PIYIGFGSLP VQEPEKMTQI IVDALEQTGQ RGIINKGWGG 480 LGSLAESKDS VYLLDNVPHD WLFLQCMAVV HHGGAGTTAA GLKAACPTTI VPFFGDQPFW 540 GDRVHARGVG PAPIPIDEFS LPKLIDAIKF MLNPEVKEKA VELAKAMENE DGVSGAVKAF 600 FKHLPRKKPE LEPSVEPPSS LFSISRCFGC S* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 2.0e-35 | 189 | 598 | 417 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 7.0e-36 | 189 | 333 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 9.0e-122 | 189 | 603 | 415 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22616.1 | 0 | 17 | 631 | 6 | 609 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| DDBJ | BAC22617.1 | 0 | 52 | 631 | 28 | 602 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 6 | 631 | 3 | 615 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 6 | 631 | 50 | 662 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002521125.1 | 0 | 60 | 631 | 50 | 626 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 2e-31 | 187 | 608 | 1 | 385 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis D172aE217A MUTANT COMPLEXED WITH LACTO-N- Fucopentaose Ii |
| PDB | 3h4i_A | 2e-31 | 187 | 608 | 1 | 385 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 6e-25 | 431 | 611 | 230 | 405 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 3e-24 | 187 | 616 | 1 | 410 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 196 | 530 | 0 |
| DY295142 | 421 | 82 | 498 | 0 |
| GR715068 | 277 | 78 | 354 | 0 |
| GO883166 | 334 | 150 | 482 | 0 |
| GT046352 | 32 | 523 | 554 | 0.0001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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