Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.004G091400.1 |
Family | CE8 |
Protein Properties | Length: 564 Molecular Weight: 62792.1 Isoelectric Point: 9.1559 |
Chromosome | Chromosome/Scaffold: 04 Start: 12520862 End: 12522740 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 250 | 545 | 0 |
VTVCQDGSGNFTTINDAITAAPNNTNGVNGFYLIYISGGVYQEYISIAKNKKYLMMIGDGINQTIITGNRSVIDGWTTFNSATFAVVAPNFIAVNMTFQN TAGAIKHQAVAVRNGADLSVFYSCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNIYPRRPMNGQFNAITAQGRTDPNQNTGTSIHDCN IMAADDLASSNTTFKTYLGRPWKEYSRTVYMQNFMDSLINPAGWKEWNGDFALNTSYYAEYNNNGPGSNTSNRITWSGYHVINATDATNFTVSSFL |
Full Sequence |
---|
Protein Sequence Length: 564 Download |
MAQLCSLLTL CLFFLVPFFL SPSFAGVPPS APVSARTICK STPNPSYCRA VLPNHTTNVY 60 NYGRFSIRKS LSQSRKFLKL VDKYLRKYQP SLPTSAIHAL QDCRFLTVLN IDFLLSSFKT 120 VNGTSTTLSL VEADDIQTFL SAILTNQQTC LDGIQSIAST WSIRNGLSVP LSNDTKLYSV 180 SLALFTKGWV PKKKRKATWK PRNKQRGFKR GRLHLKMSSR TRSIYETVSR RKLLQTTDDT 240 DEEVLVSDIV TVCQDGSGNF TTINDAITAA PNNTNGVNGF YLIYISGGVY QEYISIAKNK 300 KYLMMIGDGI NQTIITGNRS VIDGWTTFNS ATFAVVAPNF IAVNMTFQNT AGAIKHQAVA 360 VRNGADLSVF YSCSFEGYQD TLYTHSLRQF YRECDIYGTV DFIFGNAAVV FQNCNIYPRR 420 PMNGQFNAIT AQGRTDPNQN TGTSIHDCNI MAADDLASSN TTFKTYLGRP WKEYSRTVYM 480 QNFMDSLINP AGWKEWNGDF ALNTSYYAEY NNNGPGSNTS NRITWSGYHV INATDATNFT 540 VSSFLLGDDW LLDTGVPYNA SLI* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02416 | PLN02416 | 1.0e-154 | 34 | 562 | 545 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 9.0e-155 | 99 | 562 | 466 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 28 | 563 | 541 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 39 | 563 | 539 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 250 | 548 | 300 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_563662.1 | 0 | 37 | 563 | 30 | 578 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002268492.1 | 0 | 37 | 562 | 34 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302726.1 | 0 | 2 | 563 | 3 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 27 | 563 | 28 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523112.1 | 0 | 17 | 563 | 22 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 252 | 558 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 242 | 562 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-21 | 249 | 520 | 7 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-21 | 249 | 520 | 7 | 314 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-21 | 249 | 520 | 7 | 314 | A Chain A, Pectin Methylesterase From Carrot |