| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G092600.4 |
| Family | GT48 |
| Protein Properties | Length: 1802 Molecular Weight: 208959 Isoelectric Point: 8.7139 |
| Chromosome | Chromosome/Scaffold: 04 Start: 13088662 End: 13118926 |
| Description | glucan synthase-like 12 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT48 | 1053 | 1783 | 0 |
| VPSNIDARRRISFFSNSLFMDMPAAPKVRNMLSFTVLTPYYTEEVLFSLQELEEPNEDGVSILFYLQKIFPDEWNNFLERVERNNEEELKESPELEEKLR LWASYRGQTLTRTVRGMMYYREALELQAFLDMAKHEDLMEGYKAIELNTEDSEENRSLKAQCEAVADMKFMYVVSCQQYGIQKRSGSERAQDILRLMTKY PSLRVAYIDEIEQRSEDRSKKLNGKVNYFSVLVRAVPKSFDSSEQNLDQEIYRIKLPGPAILGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMR NLLQEFLKKHDGVRYPTILGLREHIFTGSVSSLAWFMSNQETSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASRVINLSEDIFAGFSSTL REGNVTHHEYIQVGKGRDVGLNQISMFEAKIANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLVTVLTVYVFLYGRLYLVLSGLEQGLREEP AIRDNKPLQVALASQSFVQIGFLMALPMLMEIGLERGFQTALSEFILMQLQLAPVFFTFSLGTKTHYYGRTLLHGGAKYRPTGRGFVVFHAKFAENYRLY SRSHFVKGIEMMILLIVYQICGHTYRSTVAYVLITVSLWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWINNRGGIGVPSEKSWESWWEEEQEHLQY SGKRGIIAEILLALRFFIYQYGLVYHLHVTR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1802 Download |
| MSSSRGSDQS QLMRRITRTQ TAGNLGETAF DSEVVPSSLS EIAPILRVAN EVESSNPRVA 60 YLCRFYAFEK AHRLDPTSSG RGVRQFKTAL LQRLERENDP TLQGRVKKSD AREMQSFYQH 120 YYKKYIQALT NAADKADRAQ LTKAYQTANV LFEVLKAVNL TQSIEVDREI LEAQDKVAEQ 180 TQILVPYNIL PLDPDSANQA IMQYPEIQAA VYALRNTRGL PWPNDHKRKK DEDILDWLQE 240 MFGFQKDNVA NQREHLILLL ANVHIRRFPK PDQQPKLDDH ALTEVMKKLF KNYKKWCKYL 300 DRKSSLWLPT IQQEVQQRKL LYMGLYLLIW GEAANLRFMP ECLCYIYHHM AFELYGMLAG 360 NVSPLTGENI QPAYGGEEEA FLQKVVTPIY EVIRREAERS KRGKSKHSQW RNYDDLNEYF 420 WSVDCFRLGW PIRADADFFC LPIEQIEKNG DNKPQATRDR WVGKVNFVEI RSFWHVFRSF 480 DRMWSFFILC LQVMIIVAWN GNGQPSSIFT GDVFKKVLSV FITAAILKLG QAVLDVILSW 540 KAQQSMSFHV KLRYILKVVS AAAWVIVLPV TYAYTSDNPS EIARTIQSWF GSTSSSPSLF 600 ILAVVIYLSP NMLAAILFLF PFVRRFLESS HYKIVMLMMW WSQPRLYVGR GMHESTFSLF 660 KYTMFWVLLI ITKLAFSYYI EIKPLVRPTK AIMSVRVRHF QWHEFFPQAR NNIGVVIALW 720 APIILVYFMD TQIWYAIFST LFGGIYGAFR RLGEIRTLGM LRSRFGSLPG AFNDCLIPGD 780 KSEKKNKGFW LFFSRSFGQP LSNKEKEAAK FAQLWNKIIS SFREEDLISN KEMNLLLVPY 840 WADRDLDQIQ WPPFLLASKI PIALDMAKDS DSRDRELQKR IEADPYMFCA IRECYASFRS 900 IIRFLVEGKR EKRVIDDIFF KVDKRIADGS LIKTYKMSAV PSLCDHIVKL IKLLLENKQD 960 ERGQVVLCFQ DMLEIVTKDI MAEEEFSSLE HGGSGHDGMN PDPLHQLFDT KKLDQLFAST 1020 GAIKFPTPVS EAWREKINRL YLLLTTKESA MDVPSNIDAR RRISFFSNSL FMDMPAAPKV 1080 RNMLSFTVLT PYYTEEVLFS LQELEEPNED GVSILFYLQK IFPDEWNNFL ERVERNNEEE 1140 LKESPELEEK LRLWASYRGQ TLTRTVRGMM YYREALELQA FLDMAKHEDL MEGYKAIELN 1200 TEDSEENRSL KAQCEAVADM KFMYVVSCQQ YGIQKRSGSE RAQDILRLMT KYPSLRVAYI 1260 DEIEQRSEDR SKKLNGKVNY FSVLVRAVPK SFDSSEQNLD QEIYRIKLPG PAILGEGKPE 1320 NQNHAIIFTR GEGLQTIDMN QDNYMEEALK MRNLLQEFLK KHDGVRYPTI LGLREHIFTG 1380 SVSSLAWFMS NQETSFVTIG QRLLANPLKV RFHYGHPDVF DRLFHLTRGG VSKASRVINL 1440 SEDIFAGFSS TLREGNVTHH EYIQVGKGRD VGLNQISMFE AKIANGNGEQ TLSRDIYRLG 1500 HRFDFFRMLS CYFTTVGFYF STLVTVLTVY VFLYGRLYLV LSGLEQGLRE EPAIRDNKPL 1560 QVALASQSFV QIGFLMALPM LMEIGLERGF QTALSEFILM QLQLAPVFFT FSLGTKTHYY 1620 GRTLLHGGAK YRPTGRGFVV FHAKFAENYR LYSRSHFVKG IEMMILLIVY QICGHTYRST 1680 VAYVLITVSL WFMVGTWLFA PFLFNPSGFE WQKIVDDWTD WNKWINNRGG IGVPSEKSWE 1740 SWWEEEQEHL QYSGKRGIIA EILLALRFFI YQYGLVYHLH VTRETKSFLV GSSLFPWPFF 1800 P* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam04652 | DUF605 | 6.0e-10 | 42 | 156 | 124 | + Vta1 like. Vta1 (VPS20-associated protein 1) is a positive regulator of Vps4. Vps4 is an ATPase that is required in the multivesicular body (MVB) sorting pathway to dissociate the endosomal sorting complex required for transport (ESCRT). Vta1 promotes correct assembly of Vps4 and stimulates its ATPase activity through its conserved Vta1/SBP1/LIP5 region. | ||
| pfam14288 | FKS1_dom1 | 2.0e-58 | 317 | 433 | 118 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
| pfam02364 | Glucan_synthase | 0 | 1053 | 1801 | 817 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000148 | 1,3-beta-D-glucan synthase complex |
| GO:0003843 | 1,3-beta-D-glucan synthase activity |
| GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16456.1 | 0 | 1 | 1790 | 1 | 1788 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | Q9LXT9 | 0 | 1 | 1790 | 1 | 1804 | CALS3_ARATH RecName: Full=Callose synthase 3; AltName: Full=1,3-beta-glucan synthase; AltName: Full=Protein GLUCAN SYNTHASE-LIKE 12 |
| RefSeq | XP_002283298.1 | 0 | 1 | 1790 | 1 | 1787 | PREDICTED: similar to Callose synthase 3 [Vitis vinifera] |
| RefSeq | XP_002299147.1 | 0 | 11 | 1790 | 16 | 1780 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528124.1 | 0 | 2 | 1790 | 3 | 1795 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2lxm_A | 0.004 | 46 | 155 | 21 | 128 | B Chain B, Lip5-chmp5 |
| PDB | 2lxl_A | 0.005 | 46 | 155 | 21 | 128 | A Chain A, Lip5(mit)2 |
