| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G128700.5 |
| Family | GT5 |
| Protein Properties | Length: 584 Molecular Weight: 64485.6 Isoelectric Point: 8.9122 |
| Chromosome | Chromosome/Scaffold: 04 Start: 34283494 End: 34287180 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 84 | 580 | 0 |
| NIVFVSAECGPWSKTGGLGDVLGGLPPAMAAKGHRVMTVCPRYDQYKDAWDTSVLVDLKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKVWGKTASKIY GPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIANDWHSALLPCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLP ERFKSSFDFIDGYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELDNIIRKTGITGIVNGMDVQEWNPASDKYISVKYDATTVMKAKPL LKEALQAEVGLPCDGDVPLIGFIGRLEEQKGSDILAEAIPKLVAENCQIVVLGTGKKAMEKQIEQLEIQYPDNVRAVAKFNVSLAHMIIAGADYILVPSR FEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDPSDVIKVVKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKM | |||
| Full Sequence |
|---|
| Protein Sequence Length: 584 Download |
| MATLTTSHFV STSSHFSSHG ADTKANLAQV GARNQAMTHN GLRSLNKVDR LQIRTTNAKA 60 VVTKAMKQAD HRPLGKIICG IGMNIVFVSA ECGPWSKTGG LGDVLGGLPP AMAAKGHRVM 120 TVCPRYDQYK DAWDTSVLVD LKVGDKVVTV RFFHCYKRGV DRVFVDHPMF LEKVWGKTAS 180 KIYGPRAGLD YEDNQLRFSL LCQAALEAPR VLNLNSSKNF SGPYGEDVVF IANDWHSALL 240 PCYLKSMYQS RGIYMNAKVV FCIHNIAYQG RFAFADFKRL NLPERFKSSF DFIDGYNKPV 300 KGRKINWMKA GILESHRVLT VSPYYAQELV SGEDKGVELD NIIRKTGITG IVNGMDVQEW 360 NPASDKYISV KYDATTVMKA KPLLKEALQA EVGLPCDGDV PLIGFIGRLE EQKGSDILAE 420 AIPKLVAENC QIVVLGTGKK AMEKQIEQLE IQYPDNVRAV AKFNVSLAHM IIAGADYILV 480 PSRFEPCGLI QLHAMRYGTV PIVASTGGLV DTVKEGFTGF QMGAFNVECD EVDPSDVIKV 540 VKTVKRALAT YGTQALKEMI QNCMAQDFSW KGPSRLWEKM LLT* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PRK14099 | PRK14099 | 4.0e-89 | 83 | 580 | 513 | + glycogen synthase; Provisional |
| COG0297 | GlgA | 3.0e-112 | 83 | 581 | 516 | + Glycogen synthase [Carbohydrate transport and metabolism] |
| PRK00654 | glgA | 3.0e-138 | 83 | 570 | 499 | + glycogen synthase; Provisional |
| TIGR02095 | glgA | 8.0e-174 | 83 | 581 | 507 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-176 | 84 | 581 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACJ11735.1 | 0 | 1 | 583 | 1 | 583 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACJ11751.1 | 0 | 1 | 583 | 1 | 583 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACM78591.1 | 0 | 1 | 583 | 1 | 589 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACV72639.1 | 0 | 1 | 583 | 1 | 583 | granule-bound starch synthase 1 [Gossypium hirsutum] |
| Swiss-Prot | Q43784 | 0 | 1 | 582 | 1 | 581 | SSG1_MANES RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 83 | 582 | 10 | 509 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 83 | 582 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 83 | 580 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 83 | 580 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 83 | 580 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 583 | 1 | 583 | 0 |
| HO825853 | 493 | 91 | 583 | 0 |
| HO629148 | 565 | 26 | 583 | 0 |
| ES796214 | 321 | 252 | 572 | 0 |
| ES805653 | 311 | 271 | 581 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
