| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G128700.9 |
| Family | GT5 |
| Protein Properties | Length: 472 Molecular Weight: 52301.5 Isoelectric Point: 7.4107 |
| Chromosome | Chromosome/Scaffold: 04 Start: 34283494 End: 34287180 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 3 | 442 | 0 |
| LKVGDKVVTVRFFHCYKRGVDRVFVDHPMFLEKVWGKTASKIYGPRAGLDYEDNQLRFSLLCQAALEAPRVLNLNSSKNFSGPYGEDVVFIANDWHSALL PCYLKSMYQSRGIYMNAKVVFCIHNIAYQGRFAFADFKRLNLPERFKSSFDFIDGYNKPVKGRKINWMKAGILESHRVLTVSPYYAQELVSGEDKGVELD NIIRKTGITGIVNGMDVQEWNPASDKYISVKYDATTVMKAKPLLKEALQAEVGLPCDGDVPLIGFIGRLEEQKGSDILAEAIPKLVAENCQIVVLGTGKK AMEKQIEQLEIQYPDNVRAVAKFNVSLAHMIIAGADYILVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECDEVDPSDVIKV VKTVKRALATYGTQALKEMIQNCMAQDFSWKGPSRLWEKM | |||
| Full Sequence |
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| Protein Sequence Length: 472 Download |
| MQLKVGDKVV TVRFFHCYKR GVDRVFVDHP MFLEKVWGKT ASKIYGPRAG LDYEDNQLRF 60 SLLCQAALEA PRVLNLNSSK NFSGPYGEDV VFIANDWHSA LLPCYLKSMY QSRGIYMNAK 120 VVFCIHNIAY QGRFAFADFK RLNLPERFKS SFDFIDGYNK PVKGRKINWM KAGILESHRV 180 LTVSPYYAQE LVSGEDKGVE LDNIIRKTGI TGIVNGMDVQ EWNPASDKYI SVKYDATTVM 240 KAKPLLKEAL QAEVGLPCDG DVPLIGFIGR LEEQKGSDIL AEAIPKLVAE NCQIVVLGTG 300 KKAMEKQIEQ LEIQYPDNVR AVAKFNVSLA HMIIAGADYI LVPSRFEPCG LIQLHAMRYG 360 TVPIVASTGG LVDTVKEGFT GFQMGAFNVE CDEVDPSDVI KVVKTVKRAL ATYGTQALKE 420 MIQNCMAQDF SWKGPSRLWE KMLLSLGVAG SEPGIEGEEV APLAKENVAT P* 480 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PRK14099 | PRK14099 | 4.0e-89 | 50 | 446 | 412 | + glycogen synthase; Provisional |
| COG0297 | GlgA | 2.0e-103 | 21 | 443 | 441 | + Glycogen synthase [Carbohydrate transport and metabolism] |
| PRK00654 | glgA | 1.0e-129 | 10 | 432 | 434 | + glycogen synthase; Provisional |
| TIGR02095 | glgA | 3.0e-158 | 3 | 446 | 448 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 3.0e-160 | 3 | 443 | 450 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACH72975.1 | 0 | 1 | 471 | 145 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACJ11735.1 | 0 | 1 | 471 | 139 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACJ11751.1 | 0 | 1 | 471 | 139 | 609 | granule bound starch synthase [Gossypium hirsutum] |
| GenBank | ACM78591.1 | 0 | 1 | 471 | 145 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACV72639.1 | 0 | 1 | 471 | 139 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 2 | 471 | 67 | 536 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3vue_A | 0 | 2 | 471 | 67 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 53 | 446 | 103 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 53 | 446 | 103 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 53 | 446 | 103 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 472 | 1 | 472 | 0 |
| HO825853 | 470 | 1 | 470 | 0 |
| ES793310 | 333 | 140 | 472 | 0 |
| ES796214 | 358 | 114 | 471 | 0 |
| HO629148 | 473 | 1 | 472 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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