| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G128800.1 |
| Family | GH17 |
| Protein Properties | Length: 407 Molecular Weight: 44662.1 Isoelectric Point: 5.8579 |
| Chromosome | Chromosome/Scaffold: 04 Start: 34293220 End: 34295049 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 24 | 340 | 0 |
| IGINYGQIANNLPSPEDVVPLVKSIGATKIKLYDADPRVLKAFANTDVEFMVGLGNEYLDKMRDPTNAQAWVKENIQPHLPATKITSIFVGNEVLTLNDT SLSDCLLPAMQSVHAALLNFGLDKQVTVTTTHSLAILQTSYPPSAGAFREDLMDPLCETLNFHQKTGSPFLINAYPYFAYKGNPEQVPLDFVLFQPNQGV TDPQTHLHYDNMLYAQIDAVYSALASLGYKKLLVHISETGWPSKGDEDEAGATPENAEKYNGNLIKLMSGKTGTPMRPNSDLNIYIFALFNENMKPGPTS ERNYGLFKPDGTPAYPL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 407 Download |
| MDLPEFFCYV SILSCLFPIM VNSIGINYGQ IANNLPSPED VVPLVKSIGA TKIKLYDADP 60 RVLKAFANTD VEFMVGLGNE YLDKMRDPTN AQAWVKENIQ PHLPATKITS IFVGNEVLTL 120 NDTSLSDCLL PAMQSVHAAL LNFGLDKQVT VTTTHSLAIL QTSYPPSAGA FREDLMDPLC 180 ETLNFHQKTG SPFLINAYPY FAYKGNPEQV PLDFVLFQPN QGVTDPQTHL HYDNMLYAQI 240 DAVYSALASL GYKKLLVHIS ETGWPSKGDE DEAGATPENA EKYNGNLIKL MSGKTGTPMR 300 PNSDLNIYIF ALFNENMKPG PTSERNYGLF KPDGTPAYPL GITPNNVVGR NTTVGGGRFG 360 NAVTNPYYPM SSSTGYMSIS SARQQRYQLL GHVVRMVPLL IIKTLV* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG5309 | COG5309 | 1.0e-11 | 25 | 319 | 303 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
| pfam00332 | Glyco_hydro_17 | 4.0e-98 | 24 | 340 | 321 | + Glycosyl hydrolases family 17. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PIR | 0 | 18 | 348 | 26 | 356 | UP10_LACSN Unknown protein 10 from 2D-PAGE | |
| RefSeq | XP_002278950.1 | 0 | 30 | 385 | 33 | 384 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300505.1 | 0 | 7 | 342 | 1 | 333 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002317055.1 | 0 | 20 | 343 | 1 | 324 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518930.1 | 0 | 1 | 405 | 1 | 404 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 24 | 340 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_C | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_B | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_A | 0 | 24 | 343 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
