y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G146900.1 |
Family | CE8 |
Protein Properties | Length: 558 Molecular Weight: 62128.5 Isoelectric Point: 8.0533 |
Chromosome | Chromosome/Scaffold: 04 Start: 41391052 End: 41393623 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 243 | 538 | 0 |
AVVAKDGSGQFKTIAEALAAAPKNSINRHIIYIKAGIYDEYITVDKQYTNILIFGDGPRRTIVAGRKGVKDGGGITTWQTATFSAIGNGFIAKSMGFQNN AGPEKHQAVALRIQSDKSAFFNCRMDGYQDTLYNHANRQFFRNCVISGTVDFIFGDSPTVIQNSLLIVRRPMEGQSNMVTAQGKTRIDENTGTVIQNCRI VPEQKLFIDRFKFPTYLGRPWKPYSTTIIMESTLGDFIRREGWMPFATQNHEDTLYYAEYNNRGPGANLDARVNWKGYHKIDKATAMKFTVEAFLH |
Full Sequence |
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Protein Sequence Length: 558 Download |
MSNKVVVAGV SIILVVGVAI GVVTTINHSR DAKGKLSPEM KVATSICAPT HYPDTCQKTF 60 DSMNSTDPKE FVKKAIYAAE EEVKKFLNFS NSKIAEAKDN GLTKMALNDC KDMMQYAIDS 120 LEATYADVDG SDLHNIDDRI NDFRTWLSAV ISYQQSCLDG FEHDRNLKET MEEAIVASSE 180 HAANALTIVT KLIEILTKLG SELASPDTRR LFSVEETNYP SWFSTTDRKL IAKIDNSNLK 240 PNAVVAKDGS GQFKTIAEAL AAAPKNSINR HIIYIKAGIY DEYITVDKQY TNILIFGDGP 300 RRTIVAGRKG VKDGGGITTW QTATFSAIGN GFIAKSMGFQ NNAGPEKHQA VALRIQSDKS 360 AFFNCRMDGY QDTLYNHANR QFFRNCVISG TVDFIFGDSP TVIQNSLLIV RRPMEGQSNM 420 VTAQGKTRID ENTGTVIQNC RIVPEQKLFI DRFKFPTYLG RPWKPYSTTI IMESTLGDFI 480 RREGWMPFAT QNHEDTLYYA EYNNRGPGAN LDARVNWKGY HKIDKATAMK FTVEAFLHSK 540 ENWLPSTGIP FTAGLRY* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02217 | PLN02217 | 2.0e-152 | 25 | 555 | 535 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 1.0e-160 | 25 | 555 | 538 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 1.0e-161 | 37 | 555 | 539 | + pectinesterase | ||
pfam01095 | Pectinesterase | 4.0e-168 | 242 | 537 | 297 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 41 | 555 | 527 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI26012.1 | 0 | 31 | 556 | 39 | 568 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274176.1 | 0 | 31 | 556 | 35 | 564 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002275000.1 | 0 | 31 | 556 | 39 | 568 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298186.1 | 0 | 36 | 556 | 41 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303172.1 | 0 | 34 | 556 | 40 | 559 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 235 | 555 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 242 | 555 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 6e-26 | 242 | 546 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 6e-26 | 242 | 546 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 6e-26 | 242 | 546 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |