| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G158600.1 |
| Family | GH14 |
| Protein Properties | Length: 715 Molecular Weight: 80243.7 Isoelectric Point: 5.7114 |
| Chromosome | Chromosome/Scaffold: 04 Start: 44777016 End: 44784041 |
| Description | beta-amylase 7 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 269 | 686 | 0 |
| YVMLPLGVINMKCELADPDGLLKQLRVLKSINVDGVMVDCWWGIVEAHAPQEYNWNGYQRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRSNPEIFFTDREGRRNPECLSWGIDKERVLRGRTAVEVYFDYMRSFRVEFDEFFEDGIISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYML KSLRKAAEMRGHSFWARGPDNAGSYNSQPHETGFFCDGGGYDGYYGRFFLNWYSQVLLNHGDRVLSLAKLAFDGTCITAKLPGIHWWYKAASHAAELTAG YYNPCNRDGYTAIATMLQKHGAALSFSCAEHHILEQQDHLREALADPRGLVWQVLNAAWDVSIPIASENAFLCHDRVGYNKILDNVKPVNDPDGRHFSSF TYHRLSPLLMERQNFMEF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 715 Download |
| MATSMQKLVG VSQEDDEEEM EMDVKEEDDE DEENGEKQIA AQMMIGVDEV MPSTSSSDQF 60 QYQPQLQEQV SNQSGGGGAR RSRPLEEKER TKLRERHRRA ITARILAGLR RHGNYNLRVR 120 ADINDVIAAL AREAGWVVLP DGTTFPSRSQ SSPAAGTSAG MTSSSSQMVS QQIPPPPATL 180 QGVSSGYRTT VEYNACRMKG VFMPTPSHYD LSSTAPAQSL GVVADGGEQT ERLPLIAGST 240 QVINDKQIIG LPTKLPERDF AGTPYVPVYV MLPLGVINMK CELADPDGLL KQLRVLKSIN 300 VDGVMVDCWW GIVEAHAPQE YNWNGYQRLF QMVRELKLKL QVVMSFHECG GNVGDDVCIP 360 LPHWVAEIGR SNPEIFFTDR EGRRNPECLS WGIDKERVLR GRTAVEVYFD YMRSFRVEFD 420 EFFEDGIISM VEVGLGPCGE LRYPSCPVKH GWRYPGIGEF QCYDQYMLKS LRKAAEMRGH 480 SFWARGPDNA GSYNSQPHET GFFCDGGGYD GYYGRFFLNW YSQVLLNHGD RVLSLAKLAF 540 DGTCITAKLP GIHWWYKAAS HAAELTAGYY NPCNRDGYTA IATMLQKHGA ALSFSCAEHH 600 ILEQQDHLRE ALADPRGLVW QVLNAAWDVS IPIASENAFL CHDRVGYNKI LDNVKPVNDP 660 DGRHFSSFTY HRLSPLLMER QNFMEFERFV KRMHGELLYT FSSRLLLFIS ISGD* 720 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN00197 | PLN00197 | 6.0e-135 | 266 | 693 | 435 | + beta-amylase; Provisional |
| PLN02803 | PLN02803 | 9.0e-156 | 266 | 693 | 432 | + beta-amylase |
| PLN02905 | PLN02905 | 0 | 1 | 696 | 696 | + beta-amylase |
| PLN02705 | PLN02705 | 0 | 75 | 697 | 626 | + beta-amylase |
| PLN02801 | PLN02801 | 0 | 265 | 699 | 443 | + beta-amylase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAC28536.1 | 0 | 1 | 701 | 1 | 683 | putative beta-amylase [Arabidopsis thaliana] |
| EMBL | CBI40368.1 | 0 | 44 | 696 | 1 | 650 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_182112.2 | 0 | 1 | 696 | 1 | 678 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002273843.1 | 0 | 1 | 696 | 1 | 692 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002511857.1 | 0 | 1 | 696 | 4 | 697 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1wdr_A | 0 | 265 | 699 | 11 | 447 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byd_A | 0 | 265 | 699 | 11 | 447 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byc_A | 0 | 265 | 699 | 11 | 447 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1byb_A | 0 | 265 | 699 | 11 | 447 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1bya_A | 0 | 265 | 699 | 11 | 447 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG638376 | 267 | 274 | 540 | 0 |
| DT587209 | 255 | 282 | 536 | 0 |
| HO064443 | 239 | 254 | 492 | 0 |
| EH764943 | 252 | 246 | 497 | 0 |
| DV021150 | 292 | 351 | 642 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
