Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G158600.14 |
Family | GH14 |
Protein Properties | Length: 563 Molecular Weight: 62741 Isoelectric Point: 5.1213 |
Chromosome | Chromosome/Scaffold: 04 Start: 44776650 End: 44784041 |
Description | beta-amylase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 269 | 549 | 0 |
YVMLPLGVINMKCELADPDGLLKQLRVLKSINVDGVMVDCWWGIVEAHAPQEYNWNGYQRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRSNPEIFFTDREGRRNPECLSWGIDKERVLRGRTAVEVYFDYMRSFRVEFDEFFEDGIISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYML KSLRKAAEMRGHSFWARGPDNAGSYNSQPHETGFFCDGGGYDGYYGRFFLNWYSQVLLNHGDRVLSLAKLAFDGTCITAKV |
Full Sequence |
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Protein Sequence Length: 563 Download |
MATSMQKLVG VSQEDDEEEM EMDVKEEDDE DEENGEKQIA AQMMIGVDEV MPSTSSSDQF 60 QYQPQLQEQV SNQSGGGGAR RSRPLEEKER TKLRERHRRA ITARILAGLR RHGNYNLRVR 120 ADINDVIAAL AREAGWVVLP DGTTFPSRSQ SSPAAGTSAG MTSSSSQMVS QQIPPPPATL 180 QGVSSGYRTT VEYNACRMKG VFMPTPSHYD LSSTAPAQSL GVVADGGEQT ERLPLIAGST 240 QVINDKQIIG LPTKLPERDF AGTPYVPVYV MLPLGVINMK CELADPDGLL KQLRVLKSIN 300 VDGVMVDCWW GIVEAHAPQE YNWNGYQRLF QMVRELKLKL QVVMSFHECG GNVGDDVCIP 360 LPHWVAEIGR SNPEIFFTDR EGRRNPECLS WGIDKERVLR GRTAVEVYFD YMRSFRVEFD 420 EFFEDGIISM VEVGLGPCGE LRYPSCPVKH GWRYPGIGEF QCYDQYMLKS LRKAAEMRGH 480 SFWARGPDNA GSYNSQPHET GFFCDGGGYD GYYGRFFLNW YSQVLLNHGD RVLSLAKLAF 540 DGTCITAKVF TGGIKQPVML LN* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN00197 | PLN00197 | 1.0e-95 | 266 | 554 | 292 | + beta-amylase; Provisional |
PLN02803 | PLN02803 | 2.0e-113 | 266 | 549 | 288 | + beta-amylase |
PLN02801 | PLN02801 | 2.0e-124 | 265 | 549 | 288 | + beta-amylase |
PLN02905 | PLN02905 | 0 | 1 | 549 | 549 | + beta-amylase |
PLN02705 | PLN02705 | 0 | 75 | 549 | 478 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28536.1 | 0 | 1 | 549 | 1 | 531 | putative beta-amylase [Arabidopsis thaliana] |
EMBL | CBI40368.1 | 0 | 44 | 549 | 1 | 503 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_182112.2 | 0 | 1 | 549 | 1 | 531 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002273843.1 | 0 | 1 | 549 | 1 | 545 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511857.1 | 0 | 1 | 549 | 4 | 550 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1wdr_A | 0 | 265 | 554 | 11 | 299 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 265 | 554 | 11 | 299 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1ukp_D | 0 | 265 | 554 | 11 | 299 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_C | 0 | 265 | 554 | 11 | 299 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1ukp_B | 0 | 265 | 554 | 11 | 299 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG638376 | 267 | 274 | 540 | 0 |
DT587209 | 255 | 282 | 536 | 0 |
HO064443 | 239 | 254 | 492 | 0 |
EH764943 | 252 | 246 | 497 | 0 |
DT743760 | 231 | 274 | 504 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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