y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G158600.6 |
Family | GH14 |
Protein Properties | Length: 554 Molecular Weight: 61693.6 Isoelectric Point: 5.0455 |
Chromosome | Chromosome/Scaffold: 04 Start: 44776648 End: 44784185 |
Description | beta-amylase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 269 | 546 | 0 |
YVMLPLGVINMKCELADPDGLLKQLRVLKSINVDGVMVDCWWGIVEAHAPQEYNWNGYQRLFQMVRELKLKLQVVMSFHECGGNVGDDVCIPLPHWVAEI GRSNPEIFFTDREGRRNPECLSWGIDKERVLRGRTAVEVYFDYMRSFRVEFDEFFEDGIISMVEVGLGPCGELRYPSCPVKHGWRYPGIGEFQCYDQYML KSLRKAAEMRGHSFWARGPDNAGSYNSQPHETGFFCDGGGYDGYYGRFFLNWYSQVLLNHGDRVLSLAKLAFDGTCIT |
Full Sequence |
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Protein Sequence Length: 554 Download |
MATSMQKLVG VSQEDDEEEM EMDVKEEDDE DEENGEKQIA AQMMIGVDEV MPSTSSSDQF 60 QYQPQLQEQV SNQSGGGGAR RSRPLEEKER TKLRERHRRA ITARILAGLR RHGNYNLRVR 120 ADINDVIAAL AREAGWVVLP DGTTFPSRSQ SSPAAGTSAG MTSSSSQMVS QQIPPPPATL 180 QGVSSGYRTT VEYNACRMKG VFMPTPSHYD LSSTAPAQSL GVVADGGEQT ERLPLIAGST 240 QVINDKQIIG LPTKLPERDF AGTPYVPVYV MLPLGVINMK CELADPDGLL KQLRVLKSIN 300 VDGVMVDCWW GIVEAHAPQE YNWNGYQRLF QMVRELKLKL QVVMSFHECG GNVGDDVCIP 360 LPHWVAEIGR SNPEIFFTDR EGRRNPECLS WGIDKERVLR GRTAVEVYFD YMRSFRVEFD 420 EFFEDGIISM VEVGLGPCGE LRYPSCPVKH GWRYPGIGEF QCYDQYMLKS LRKAAEMRGH 480 SFWARGPDNA GSYNSQPHET GFFCDGGGYD GYYGRFFLNW YSQVLLNHGD RVLSLAKLAF 540 DGTCITAKAS SCC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00197 | PLN00197 | 1.0e-94 | 266 | 543 | 281 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-113 | 266 | 543 | 280 | + beta-amylase | ||
PLN02801 | PLN02801 | 9.0e-125 | 265 | 550 | 289 | + beta-amylase | ||
PLN02905 | PLN02905 | 0 | 1 | 550 | 550 | + beta-amylase | ||
PLN02705 | PLN02705 | 0 | 75 | 548 | 477 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC28536.1 | 0 | 1 | 548 | 1 | 530 | putative beta-amylase [Arabidopsis thaliana] |
EMBL | CBI40368.1 | 0 | 44 | 550 | 1 | 504 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_182112.2 | 0 | 1 | 548 | 1 | 530 | BAM7 (BETA-AMYLASE 7); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
RefSeq | XP_002273843.1 | 0 | 1 | 550 | 1 | 546 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511857.1 | 0 | 1 | 550 | 4 | 551 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v3i_A | 0 | 265 | 542 | 11 | 287 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1uko_D | 0 | 265 | 542 | 11 | 287 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_C | 0 | 265 | 542 | 11 | 287 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_B | 0 | 265 | 542 | 11 | 287 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
PDB | 1uko_A | 0 | 265 | 542 | 11 | 287 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG638376 | 267 | 274 | 540 | 0 |
DT587209 | 255 | 282 | 536 | 0 |
HO064443 | 239 | 254 | 492 | 0 |
EH764943 | 252 | 246 | 497 | 0 |
DT743760 | 231 | 274 | 504 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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