Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G211300.1 |
Family | GT47 |
Protein Properties | Length: 536 Molecular Weight: 61477.6 Isoelectric Point: 7.8823 |
Chromosome | Chromosome/Scaffold: 04 Start: 54415195 End: 54416818 |
Description | root hair specific 8 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 147 | 477 | 0 |
SCDGKGIYVYDLPSKFNKDLVGQCGDMIPWTNFCKYFNNEAMGEPLVKLGKGWYHTHQYALELIFHTRALKHPCRVYNENEAKLFYVPFYGGLDILRWHF KNVSNDVKDTLGLELVKWLENKESWQKNSGKDHVFVLGKISWDFRRKNDDVSSWGTLFLELDQLQKSIKLLIERQPWHVNDIGIPHPTYFHPHLDDDIIT WQLKIIRSNRTSLVSFAGAARPDAPQNIRSILINQCNNPGTNCRFLNCSSGGCDQPESVIELFMDSEFCLQPPGDSPTRKSVFDSLVSGCIPVLFDPFTA YYQYPWHLPEDHSKYSVFIEQEEVRKMKVNI |
Full Sequence |
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Protein Sequence Length: 536 Download |
MAISMSKKKS KPSKKLETKH HQFSDTLLFK ILNRIPLAIF LLILIFLWSS STTIISGKFV 60 HVCVSSRKLN NLYCLSAGTQ PNFEIPIPAL NNNISTGIKE VVDIVQEVPD PIVNNGSDGE 120 VAFAVKVVEQ QLQVQRSWIS NKDHVTSCDG KGIYVYDLPS KFNKDLVGQC GDMIPWTNFC 180 KYFNNEAMGE PLVKLGKGWY HTHQYALELI FHTRALKHPC RVYNENEAKL FYVPFYGGLD 240 ILRWHFKNVS NDVKDTLGLE LVKWLENKES WQKNSGKDHV FVLGKISWDF RRKNDDVSSW 300 GTLFLELDQL QKSIKLLIER QPWHVNDIGI PHPTYFHPHL DDDIITWQLK IIRSNRTSLV 360 SFAGAARPDA PQNIRSILIN QCNNPGTNCR FLNCSSGGCD QPESVIELFM DSEFCLQPPG 420 DSPTRKSVFD SLVSGCIPVL FDPFTAYYQY PWHLPEDHSK YSVFIEQEEV RKMKVNIIEK 480 LKKVPLRERE DMRRYIVYEL LPGLVYGDSN SQLEKFQDAF SITINNLLAR VNKIE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1907 | COG1907 | 0.002 | 465 | 528 | 64 | + Predicted archaeal sugar kinases [General function prediction only] | ||
pfam03016 | Exostosin | 8.0e-65 | 147 | 484 | 354 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI34680.1 | 0 | 1 | 535 | 456 | 993 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_176534.2 | 0 | 124 | 533 | 252 | 662 | catalytic [Arabidopsis thaliana] |
RefSeq | XP_002269913.1 | 0 | 1 | 535 | 1 | 538 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299537.1 | 0 | 1 | 535 | 1 | 573 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509789.1 | 0 | 1 | 535 | 1 | 567 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |