y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G244100.1 |
Family | CE10 |
Protein Properties | Length: 345 Molecular Weight: 38668.1 Isoelectric Point: 6.7829 |
Chromosome | Chromosome/Scaffold: 04 Start: 58144519 End: 58146929 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 54 | 339 | 0 |
PANLNPVDGVFSFDVLIDRATGLLCRIYRPATAEEPEPNIVELEKPVVGDVVPVIIFFHGGSFAHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENR YPCAYDDGWTAFKWVNSRSWLQSRKDSKVHIYLAGDSSGGNIAHHVAARAVESGIDVLGNILLNPMFGGQERTESEKRLDGKYFVTLRDRDWYWRAFLPE GENRDHPACNPFGPNGRSLEGIKFPKSLVVVAGLDLIQDWQLAYVEGLRKAGKEVKLLYMEQATIGFYLLPNNNHFHTVMDEISEF |
Full Sequence |
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Protein Sequence Length: 345 Download |
MAGSNEVNLN ECKMVVPLNT WVLISSFKLA YNLLRRPDGT FNRHLAEFLD RKVPANLNPV 60 DGVFSFDVLI DRATGLLCRI YRPATAEEPE PNIVELEKPV VGDVVPVIIF FHGGSFAHSS 120 ANSAIYDTLC RRLVGICKAV VVSVNYRRAP ENRYPCAYDD GWTAFKWVNS RSWLQSRKDS 180 KVHIYLAGDS SGGNIAHHVA ARAVESGIDV LGNILLNPMF GGQERTESEK RLDGKYFVTL 240 RDRDWYWRAF LPEGENRDHP ACNPFGPNGR SLEGIKFPKS LVVVAGLDLI QDWQLAYVEG 300 LRKAGKEVKL LYMEQATIGF YLLPNNNHFH TVMDEISEFV SSDC* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 0.001 | 80 | 147 | 68 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG2272 | PnbA | 7.0e-5 | 92 | 147 | 56 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 8.0e-10 | 63 | 266 | 210 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 1.0e-35 | 17 | 324 | 312 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 9.0e-72 | 108 | 322 | 216 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN86359.1 | 0 | 1 | 344 | 1 | 344 | GID1-4 [Gossypium hirsutum] |
GenBank | ACN86360.1 | 0 | 1 | 344 | 1 | 344 | GID1-5 [Gossypium hirsutum] |
GenBank | ACN86361.1 | 0 | 1 | 344 | 1 | 344 | GID1-6 [Gossypium hirsutum] |
RefSeq | XP_002319576.1 | 0 | 1 | 344 | 1 | 344 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002512310.1 | 0 | 1 | 344 | 1 | 344 | Gibberellin receptor GID1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2zsi_A | 0 | 1 | 343 | 8 | 351 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 2zsh_A | 0 | 1 | 343 | 8 | 351 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_F | 0 | 2 | 343 | 1 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_E | 0 | 2 | 343 | 1 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3ed1_D | 0 | 2 | 343 | 1 | 350 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO795605 | 344 | 2 | 345 | 0 |
ES790010 | 343 | 1 | 343 | 0 |
HO779605 | 346 | 1 | 345 | 0 |
DT574934 | 322 | 19 | 339 | 0 |
EV240117 | 307 | 39 | 345 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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