Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G257200.1 |
Family | GT47 |
Protein Properties | Length: 510 Molecular Weight: 58280.3 Isoelectric Point: 9.7976 |
Chromosome | Chromosome/Scaffold: 04 Start: 59342055 End: 59346871 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 120 | 430 | 0 |
VRVYVYEMPSKFTYDLLWLFRNTYRETSNITSNGSPVHRLIEQHSIDYWLWADLIAPESERLLKNVVRVVKQEEADLFYVPFFTTISFFLLEKQQCKALY REALKWVTDQPAWKRSEGRDHIFPIHHPWSFKSVRRYVKNAIWLLPDMDSTGNWYKPGQVSLEKDLILPYVPNVDLCDAKCLLESESKRTTLLFFRGRLK RNAGGKIRAKIGAELTGAKDVVIEEGTAGEGGKAAAQKGMRRSIFCLSPAGDTPSSARLFDAIVSGCIPVIISDELELPFEGILDYRKMAVFISSTDAVQ PGWILRYLKSI |
Full Sequence |
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Protein Sequence Length: 510 Download |
MRAKQMPSSI LTRSKSPVIL LFAVIILALS FFFFFLFSPS STTTAAVTVP YRHPSVRPET 60 SFVASLEHFL AHKAPKIPAS SDDTVGSVID RDVRRLDERK FVKEMEWLRG DPYYPMSMPV 120 RVYVYEMPSK FTYDLLWLFR NTYRETSNIT SNGSPVHRLI EQHSIDYWLW ADLIAPESER 180 LLKNVVRVVK QEEADLFYVP FFTTISFFLL EKQQCKALYR EALKWVTDQP AWKRSEGRDH 240 IFPIHHPWSF KSVRRYVKNA IWLLPDMDST GNWYKPGQVS LEKDLILPYV PNVDLCDAKC 300 LLESESKRTT LLFFRGRLKR NAGGKIRAKI GAELTGAKDV VIEEGTAGEG GKAAAQKGMR 360 RSIFCLSPAG DTPSSARLFD AIVSGCIPVI ISDELELPFE GILDYRKMAV FISSTDAVQP 420 GWILRYLKSI SSTQIREMRR NLAEYSRHFV YSNPAQPLGP EDLVWRMMAG KLVNIKLHTR 480 RSQRVVKESR SVCTCDCRRS NSTHSNPIN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-65 | 119 | 430 | 320 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20132.1 | 0 | 127 | 503 | 1 | 377 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197191.1 | 0 | 13 | 499 | 16 | 497 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002285599.1 | 0 | 58 | 503 | 62 | 511 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325382.1 | 0 | 40 | 503 | 37 | 501 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520033.1 | 0 | 50 | 503 | 46 | 502 | catalytic, putative [Ricinus communis] |