| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G261100.1 |
| Family | GT1 |
| Protein Properties | Length: 626 Molecular Weight: 69215 Isoelectric Point: 7.1503 |
| Chromosome | Chromosome/Scaffold: 04 Start: 59642382 End: 59650579 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT1 | 184 | 591 | 0 |
| IVGTRGDVQPFVAIGKRLQADGHRVRLATHSNFKDFVLDAGLEFYPLGGDPKVLAGYMVKNKGFLPSNPSEIPVQRQQMKDIIFSLLDACKEDDPHSGVK FDVDAIIANPPAYGHTHVAEALNVPLHIFFTMPWTPTSEFPHPLSRVKHSAGYRLSYHIVDALIWLGIRDMINEFRKKTLKLRPVTYLRGSYSSPPDVPY GYIWSPHLVPKPKDWGKNIDVVGFCFLDLASSYKPPESLLKWIDAGDKPIYIGFGSLPVQQPGEMTKIIVQALEKTGQRGIINKGWGGLGNLEKPKDFVY SLDNCPHDWLFERCVAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGEQVHAKGVGPAPIPIDEFSLDKLVEAIRFMLKPEVKERADELARAMEGEDG VAGSVKAF | |||
| Full Sequence |
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| Protein Sequence Length: 626 Download |
| MADLPEATRR NTNVVSRDIS IDVSCDDSNC ADSSGCSSDM PDVEIVSEDD KSSSASGNHA 60 YYHYCTKTTL PCFTERTLAG QNMHAEASTS AIDSGSNQLS KSRRLTHSKL VKYASKFLDD 120 TVPFRKKIKW LPRLAIVKHD GTVQCDFPTD MKPHALDYVV CSAKDDIDPP DIPNIPPLQI 180 VMLIVGTRGD VQPFVAIGKR LQADGHRVRL ATHSNFKDFV LDAGLEFYPL GGDPKVLAGY 240 MVKNKGFLPS NPSEIPVQRQ QMKDIIFSLL DACKEDDPHS GVKFDVDAII ANPPAYGHTH 300 VAEALNVPLH IFFTMPWTPT SEFPHPLSRV KHSAGYRLSY HIVDALIWLG IRDMINEFRK 360 KTLKLRPVTY LRGSYSSPPD VPYGYIWSPH LVPKPKDWGK NIDVVGFCFL DLASSYKPPE 420 SLLKWIDAGD KPIYIGFGSL PVQQPGEMTK IIVQALEKTG QRGIINKGWG GLGNLEKPKD 480 FVYSLDNCPH DWLFERCVAV VHHGGAGTTA AGLKAACPTT IVPFFGDQPF WGEQVHAKGV 540 GPAPIPIDEF SLDKLVEAIR FMLKPEVKER ADELARAMEG EDGVAGSVKA FYKHFPVRKS 600 KDEPDTTQTH HHSGVFSIRR CFGHA* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03033 | Glyco_transf_28 | 6.0e-36 | 180 | 324 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 1.0e-39 | 180 | 599 | 433 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 5.0e-125 | 180 | 594 | 419 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 96 | 623 | 69 | 600 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CBI37267.1 | 0 | 95 | 623 | 79 | 613 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 95 | 623 | 126 | 660 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512608.1 | 0 | 29 | 623 | 10 | 594 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | XP_002521125.1 | 0 | 34 | 623 | 31 | 624 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 6e-30 | 178 | 601 | 1 | 387 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3h4i_A | 6e-30 | 178 | 601 | 1 | 387 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 9e-25 | 178 | 575 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 9e-25 | 178 | 575 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 9e-22 | 422 | 589 | 230 | 392 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 187 | 521 | 0 |
| GR708623 | 267 | 331 | 597 | 0 |
| GO883166 | 296 | 178 | 473 | 0 |
| HO626576 | 423 | 178 | 596 | 0 |
| GT046352 | 32 | 514 | 545 | 0.003 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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