| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.004G261100.3 |
| Family | GT1 |
| Protein Properties | Length: 471 Molecular Weight: 52272.8 Isoelectric Point: 7.6892 |
| Chromosome | Chromosome/Scaffold: 04 Start: 59642382 End: 59650591 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 148 | 437 | 2e-23 |
| IVGTRGDVQPFVAIGKRLQADGHRVRLATHSNFKDFVLDAGLEFYPLGGDPKVLAGYMVKNKGFLPSNPSEIPVQRQQMKDIIFSLLDACKEDDPHSGVK FDVDAIIANPPAYGHTHVAEALNVPLHIFFTMPWTPTSEFPHPLSRVKHSAGYRLSYHIVDALIWLGIRDMINEFRKKTLKLRPVTYLRGSYSSPPDVPY GYIWSPHLVPKPKDWGKNIDVVGFCFLDLASSYKPPESLLKWIDAGDKPIYIGFGSLPVQQPGEMTKIIVQALEKTGQRGIINKGWGGLG | |||
| Full Sequence |
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| Protein Sequence Length: 471 Download |
| MADLPEATRR NTNVVSRDIS IDVSCDDSNC ADSSGCSSDM PDVEIVSEDD KSSSASDSGS 60 NQLSKSRRLT HSKLVKYASK FLDDTVPFRK KIKWLPRLAI VKHDGTVQCD FPTDMKPHAL 120 DYVVCSAKDD IDPPDIPNIP PLQIVMLIVG TRGDVQPFVA IGKRLQADGH RVRLATHSNF 180 KDFVLDAGLE FYPLGGDPKV LAGYMVKNKG FLPSNPSEIP VQRQQMKDII FSLLDACKED 240 DPHSGVKFDV DAIIANPPAY GHTHVAEALN VPLHIFFTMP WTPTSEFPHP LSRVKHSAGY 300 RLSYHIVDAL IWLGIRDMIN EFRKKTLKLR PVTYLRGSYS SPPDVPYGYI WSPHLVPKPK 360 DWGKNIDVVG FCFLDLASSY KPPESLLKWI DAGDKPIYIG FGSLPVQQPG EMTKIIVQAL 420 EKTGQRGIIN KGWGGLGNCS SRWSWNYCCW SQSCVSNNYC SFLRGPAFLG * 480 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 2.0e-22 | 144 | 432 | 296 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 5.0e-37 | 144 | 288 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 3.0e-86 | 144 | 437 | 298 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAC22617.1 | 0 | 6 | 441 | 16 | 459 | UDP-glucose:sterol 3-O-glucosyltransferase [Panax ginseng] |
| EMBL | CAB06081.1 | 0 | 26 | 448 | 46 | 479 | UDP-glucose:sterol glucosyltransferase [Avena sativa] |
| GenBank | EEC76698.1 | 0 | 26 | 448 | 46 | 482 | hypothetical protein OsI_14701 [Oryza sativa Indica Group] |
| RefSeq | XP_002512608.1 | 0 | 29 | 448 | 10 | 470 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| RefSeq | XP_002521125.1 | 0 | 19 | 449 | 46 | 488 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 0.00000000002 | 142 | 438 | 1 | 263 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 3h4i_A | 0.00000000002 | 142 | 438 | 1 | 263 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_B | 0.000000002 | 142 | 436 | 1 | 263 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pnv_A | 0.000000002 | 142 | 436 | 1 | 263 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1pn3_B | 0.000000002 | 142 | 436 | 1 | 263 | A Chain A, Crystal Structure Of Tdp-Epi-Vancosaminyltransferase Gtfa In Complexes With Tdp And The Acceptor Substrate Dvv. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO883166 | 301 | 142 | 442 | 0 |
| GT046352 | 311 | 151 | 448 | 0 |
| JG877720 | 281 | 154 | 434 | 0 |
| EH765453 | 283 | 150 | 432 | 0 |
| FL856100 | 265 | 178 | 442 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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