y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.004G281100.1 |
Family | AA5 |
Protein Properties | Length: 647 Molecular Weight: 70925.8 Isoelectric Point: 6.6718 |
Chromosome | Chromosome/Scaffold: 04 Start: 61287923 End: 61290333 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 92 | 635 | 0 |
NASSVESTQVAAKNGIGNGTIVEAKTTFKGSWELFVENAGVSAMHLILLPKINQALMFDATVWKISKMKLPGPPCRRVEGTNKEDCYVHSILMDVETGKI RPLRLNYDTWCSSGALDINGRLVSTGGYNNGSDTVRILDLCDTCGWEEYPGALGNGRWYATQVTLGDGRFMVFGGRDFPTYEFVPPQGQKNTLKDVIDFN FLVETHDPVENNLYPFVYLSTDGNVFIFANNRSVLLNPNTQTIIHEFPVLPNGARNYPASGSACLLPIMLKPNEDRRVIPSEVLICGGASHDAYTKADLQ RPKVFLPGNTDCARLDITKRNGKWKIINMPSARLLGDMVVLPTGDVLIVNGAKTGSAGWDDAREPNLNPVLYKFQTDGTGSKFTVLNPSNIPRMYHSSFA LLPDAKILIAGSNTNPGYLDDALFPTEVRVEKFSPHYLDPNLAMFRQEIIVEKSNNQVKYGQKFTVQIRGNGEIDQQKLQVTVYSPPFVTHGISMNQRLI QLGIMEFNKNVAPNTNNIVLQAPMNGNIAPPGYYMLFVNYNGVP |
Full Sequence |
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Protein Sequence Length: 647 Download |
MASLFWRGLI ILPLLFVYVN GEHFLYPKRH TGKAELAGYK GPDSLAVDGG GFYSGPLIAD 60 DDGSTAGGNA GGTTEVKVEN LGKADGDNTN GNASSVESTQ VAAKNGIGNG TIVEAKTTFK 120 GSWELFVENA GVSAMHLILL PKINQALMFD ATVWKISKMK LPGPPCRRVE GTNKEDCYVH 180 SILMDVETGK IRPLRLNYDT WCSSGALDIN GRLVSTGGYN NGSDTVRILD LCDTCGWEEY 240 PGALGNGRWY ATQVTLGDGR FMVFGGRDFP TYEFVPPQGQ KNTLKDVIDF NFLVETHDPV 300 ENNLYPFVYL STDGNVFIFA NNRSVLLNPN TQTIIHEFPV LPNGARNYPA SGSACLLPIM 360 LKPNEDRRVI PSEVLICGGA SHDAYTKADL QRPKVFLPGN TDCARLDITK RNGKWKIINM 420 PSARLLGDMV VLPTGDVLIV NGAKTGSAGW DDAREPNLNP VLYKFQTDGT GSKFTVLNPS 480 NIPRMYHSSF ALLPDAKILI AGSNTNPGYL DDALFPTEVR VEKFSPHYLD PNLAMFRQEI 540 IVEKSNNQVK YGQKFTVQIR GNGEIDQQKL QVTVYSPPFV THGISMNQRL IQLGIMEFNK 600 NVAPNTNNIV LQAPMNGNIA PPGYYMLFVN YNGVPCRQSM WVQFLP* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 1.0e-21 | 542 | 643 | 103 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 1.0e-22 | 546 | 643 | 99 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 1.0e-99 | 135 | 379 | 250 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL84955.1 | 0 | 102 | 645 | 60 | 594 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
RefSeq | NP_197459.1 | 0 | 102 | 645 | 60 | 594 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002324431.1 | 0 | 120 | 644 | 1 | 521 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 120 | 643 | 88 | 607 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514260.1 | 0 | 119 | 644 | 94 | 612 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2wq8_A | 0.00000000000003 | 198 | 639 | 246 | 655 | A Chain A, Glycan Labelling Using Engineered Variants Of Galactose Oxidase Obtained By Directed Evolution |
PDB | 2eic_A | 0.0000000000001 | 198 | 639 | 224 | 633 | A Chain A, Crystal Structure Of Galactose Oxidase Mutant W290f |
PDB | 2eib_A | 0.0000000000003 | 198 | 639 | 224 | 633 | A Chain A, Crystal Structure Of Galactose Oxidase, W290h Mutant |
PDB | 2eid_A | 0.0000000000004 | 198 | 639 | 224 | 633 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 1k3i_A | 0.0000000000005 | 198 | 639 | 241 | 650 | A Chain A, Crystal Structure Of The Precursor Of Galactose Oxidase |