Basic Information | |
---|---|
Species | Gossypium raimondii |
Cazyme ID | Gorai.004G290300.3 |
Family | GT43 |
Protein Properties | Length: 334 Molecular Weight: 38488.7 Isoelectric Point: 6.6516 |
Chromosome | Chromosome/Scaffold: 04 Start: 61947953 End: 61950481 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT43 | 102 | 310 | 0 |
LAYTLKLVQPPLLWIVVEMTSQSEETAGILRKSGIMYRHLVCKKNLTDIKDRNVHQRNVALSHIETHRLDGIVYFADEYNVYSIDLFEQMRHIRQFGTWT VAKQTQDNNRVTLEGPVCNGTKVIGWHLNELSKRYRRFHAEMPGFAFNSTILWDPRRWHRPTLEQIRQLETVKDGFQASSIIEQVVEDESQMEGLLQDCS RIMVWELNI |
Full Sequence |
---|
Protein Sequence Length: 334 Download |
MNLISEQQAF AFEVEPTVAS FHTHDGSERN VTSMADSTEV ENNVTLNPYA LVQRQGMIEG 60 NLDNAPTNQS LPRDINPGSR KLLIVITPTH ARPHQAYYLN RLAYTLKLVQ PPLLWIVVEM 120 TSQSEETAGI LRKSGIMYRH LVCKKNLTDI KDRNVHQRNV ALSHIETHRL DGIVYFADEY 180 NVYSIDLFEQ MRHIRQFGTW TVAKQTQDNN RVTLEGPVCN GTKVIGWHLN ELSKRYRRFH 240 AEMPGFAFNS TILWDPRRWH RPTLEQIRQL ETVKDGFQAS SIIEQVVEDE SQMEGLLQDC 300 SRIMVWELNI ESNSFYPQKW LMKNNLDVIA PLA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 2.0e-66 | 102 | 312 | 220 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 6.0e-82 | 80 | 310 | 236 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 4.0e-96 | 81 | 311 | 237 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU18893.1 | 0 | 2 | 332 | 103 | 430 | unknown [Glycine max] |
EMBL | CAN81600.1 | 0 | 74 | 333 | 5 | 265 | hypothetical protein [Vitis vinifera] |
EMBL | CBI20871.1 | 0 | 1 | 333 | 117 | 448 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309550.1 | 0 | 2 | 333 | 112 | 442 | glycosyl transferase [Populus trichocarpa] |
RefSeq | XP_002516557.1 | 0 | 2 | 333 | 111 | 438 | beta-1,3-glucuronyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 5e-25 | 85 | 311 | 7 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v84_A | 5e-25 | 85 | 311 | 7 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v83_B | 5e-25 | 85 | 311 | 7 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v83_A | 5e-25 | 85 | 311 | 7 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
PDB | 1v82_B | 5e-25 | 85 | 311 | 7 | 234 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
DR164049 | 254 | 80 | 332 | 0 |
DR944678 | 275 | 53 | 326 | 0 |
GR183330 | 246 | 81 | 325 | 0 |
FE468144 | 251 | 80 | 329 | 0 |
EL357378 | 246 | 79 | 323 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|