y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G057300.1 |
Family | GH14 |
Protein Properties | Length: 537 Molecular Weight: 58794.9 Isoelectric Point: 9.4425 |
Chromosome | Chromosome/Scaffold: 05 Start: 5805609 End: 5808605 |
Description | beta-amylase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 88 | 490 | 0 |
GLPLDVVSGGTVNQFRAISAGLKALKLLGLEGVELPIWWGVVEHESMGKYNWSGYLTIAEMVRKAGLKLNVTLCFHASSQPKIPLPEWVLDIGKTKSNIF FKDRAGKPYRGCLSLAVDELAVLNGKTPMEVYQDFCESFKSAFSAFIGSTITVGITMGLGPDGELRYPSHRGFAKSGTVPGAGEFQCYDKNMLHLLKQHA EACGKPKWGLGGPHNAPAYSELPTANTFFKDHGGSWESPYGDFFLSWYSSQLIAHGDRLLSLASSVFSDSAVNIFGKVPLMHSWHGTRSHPSELTAGFYN TATRKGYEEVAEMFARNSCKIILPGMDQSDKYQLKESLSSPESLLAEIGTACNKHGVGISGQNSTVGAPDGLKQIKKNMLSENLNDSFIFQRIGAQFFAP EHF |
Full Sequence |
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Protein Sequence Length: 537 Download |
MEVSVIRSCS QATNPKTELG FSDSRFSFGK FNEKLFSRKP NSVSFESPLR RGKSGLRITA 60 QAAQSDRLPK SKSSTKSKTL NRIRLFAGLP LDVVSGGTVN QFRAISAGLK ALKLLGLEGV 120 ELPIWWGVVE HESMGKYNWS GYLTIAEMVR KAGLKLNVTL CFHASSQPKI PLPEWVLDIG 180 KTKSNIFFKD RAGKPYRGCL SLAVDELAVL NGKTPMEVYQ DFCESFKSAF SAFIGSTITV 240 GITMGLGPDG ELRYPSHRGF AKSGTVPGAG EFQCYDKNML HLLKQHAEAC GKPKWGLGGP 300 HNAPAYSELP TANTFFKDHG GSWESPYGDF FLSWYSSQLI AHGDRLLSLA SSVFSDSAVN 360 IFGKVPLMHS WHGTRSHPSE LTAGFYNTAT RKGYEEVAEM FARNSCKIIL PGMDQSDKYQ 420 LKESLSSPES LLAEIGTACN KHGVGISGQN STVGAPDGLK QIKKNMLSEN LNDSFIFQRI 480 GAQFFAPEHF PLFIEFVRKL NQPELYSGNL PTKEGTTTTT DSVHTRSNLS IHVQSA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 1.0e-76 | 118 | 404 | 293 | + beta-amylase | ||
PLN02801 | PLN02801 | 6.0e-80 | 80 | 515 | 454 | + beta-amylase | ||
PLN02161 | PLN02161 | 4.0e-88 | 82 | 501 | 439 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-96 | 85 | 502 | 433 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 8.0e-100 | 82 | 502 | 431 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 84 | 536 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 536 | 1 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 536 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 536 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 536 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 81 | 501 | 11 | 444 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1v3i_A | 0 | 73 | 519 | 2 | 459 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 73 | 519 | 2 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1b1y_A | 0 | 81 | 511 | 4 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6d_A | 0 | 73 | 519 | 2 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO129528 | 289 | 132 | 420 | 0 |
CO123249 | 280 | 118 | 397 | 0 |
CO114187 | 293 | 62 | 354 | 0 |
CO114374 | 279 | 55 | 333 | 0 |
CO113261 | 279 | 1 | 279 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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