y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G057300.2 |
Family | GH14 |
Protein Properties | Length: 536 Molecular Weight: 58695.8 Isoelectric Point: 9.4425 |
Chromosome | Chromosome/Scaffold: 05 Start: 5805609 End: 5808605 |
Description | beta-amylase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 88 | 489 | 0 |
GLPLDVVSGGTVNQFRAISAGLKALKLLGLEGVELPIWWGVVEHESMGKYNWSGYLTIAEMVRKAGLKLNVTLCFHASSQPKIPLPEWVLDIGKTKSNIF FKDRAGKPYRGCLSLAVDELAVLNGKTPMEVYQDFCESFKSAFSAFIGSTITGITMGLGPDGELRYPSHRGFAKSGTVPGAGEFQCYDKNMLHLLKQHAE ACGKPKWGLGGPHNAPAYSELPTANTFFKDHGGSWESPYGDFFLSWYSSQLIAHGDRLLSLASSVFSDSAVNIFGKVPLMHSWHGTRSHPSELTAGFYNT ATRKGYEEVAEMFARNSCKIILPGMDQSDKYQLKESLSSPESLLAEIGTACNKHGVGISGQNSTVGAPDGLKQIKKNMLSENLNDSFIFQRIGAQFFAPE HF |
Full Sequence |
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Protein Sequence Length: 536 Download |
MEVSVIRSCS QATNPKTELG FSDSRFSFGK FNEKLFSRKP NSVSFESPLR RGKSGLRITA 60 QAAQSDRLPK SKSSTKSKTL NRIRLFAGLP LDVVSGGTVN QFRAISAGLK ALKLLGLEGV 120 ELPIWWGVVE HESMGKYNWS GYLTIAEMVR KAGLKLNVTL CFHASSQPKI PLPEWVLDIG 180 KTKSNIFFKD RAGKPYRGCL SLAVDELAVL NGKTPMEVYQ DFCESFKSAF SAFIGSTITG 240 ITMGLGPDGE LRYPSHRGFA KSGTVPGAGE FQCYDKNMLH LLKQHAEACG KPKWGLGGPH 300 NAPAYSELPT ANTFFKDHGG SWESPYGDFF LSWYSSQLIA HGDRLLSLAS SVFSDSAVNI 360 FGKVPLMHSW HGTRSHPSEL TAGFYNTATR KGYEEVAEMF ARNSCKIILP GMDQSDKYQL 420 KESLSSPESL LAEIGTACNK HGVGISGQNS TVGAPDGLKQ IKKNMLSENL NDSFIFQRIG 480 AQFFAPEHFP LFIEFVRKLN QPELYSGNLP TKEGTTTTTD SVHTRSNLSI HVQSA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 5.0e-76 | 118 | 403 | 293 | + beta-amylase | ||
PLN02801 | PLN02801 | 2.0e-78 | 80 | 514 | 454 | + beta-amylase | ||
PLN02161 | PLN02161 | 8.0e-90 | 82 | 500 | 438 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-97 | 85 | 501 | 432 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 2.0e-101 | 82 | 501 | 430 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 84 | 535 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 1 | 535 | 1 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 1 | 535 | 1 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 1 | 535 | 1 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002516865.1 | 0 | 1 | 535 | 1 | 545 | Beta-amylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 81 | 500 | 11 | 444 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1v3i_A | 0 | 73 | 518 | 2 | 459 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 73 | 518 | 2 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1b1y_A | 0 | 81 | 510 | 4 | 440 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1q6d_A | 0 | 73 | 518 | 2 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CO129528 | 288 | 132 | 419 | 0 |
CO123249 | 279 | 118 | 396 | 0 |
CO114187 | 292 | 62 | 353 | 0 |
CO113261 | 278 | 1 | 278 | 0 |
CO114374 | 279 | 55 | 332 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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