y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G057300.3 |
Family | GH14 |
Protein Properties | Length: 469 Molecular Weight: 51378.7 Isoelectric Point: 8.2182 |
Chromosome | Chromosome/Scaffold: 05 Start: 5805609 End: 5807335 |
Description | beta-amylase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH14 | 21 | 422 | 0 |
GLPLDVVSGGTVNQFRAISAGLKALKLLGLEGVELPIWWGVVEHESMGKYNWSGYLTIAEMVRKAGLKLNVTLCFHASSQPKIPLPEWVLDIGKTKSNIF FKDRAGKPYRGCLSLAVDELAVLNGKTPMEVYQDFCESFKSAFSAFIGSTITGITMGLGPDGELRYPSHRGFAKSGTVPGAGEFQCYDKNMLHLLKQHAE ACGKPKWGLGGPHNAPAYSELPTANTFFKDHGGSWESPYGDFFLSWYSSQLIAHGDRLLSLASSVFSDSAVNIFGKVPLMHSWHGTRSHPSELTAGFYNT ATRKGYEEVAEMFARNSCKIILPGMDQSDKYQLKESLSSPESLLAEIGTACNKHGVGISGQNSTVGAPDGLKQIKKNMLSENLNDSFIFQRIGAQFFAPE HF |
Full Sequence |
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Protein Sequence Length: 469 Download |
MLSRLFGCFI LQLNRIRLFA GLPLDVVSGG TVNQFRAISA GLKALKLLGL EGVELPIWWG 60 VVEHESMGKY NWSGYLTIAE MVRKAGLKLN VTLCFHASSQ PKIPLPEWVL DIGKTKSNIF 120 FKDRAGKPYR GCLSLAVDEL AVLNGKTPME VYQDFCESFK SAFSAFIGST ITGITMGLGP 180 DGELRYPSHR GFAKSGTVPG AGEFQCYDKN MLHLLKQHAE ACGKPKWGLG GPHNAPAYSE 240 LPTANTFFKD HGGSWESPYG DFFLSWYSSQ LIAHGDRLLS LASSVFSDSA VNIFGKVPLM 300 HSWHGTRSHP SELTAGFYNT ATRKGYEEVA EMFARNSCKI ILPGMDQSDK YQLKESLSSP 360 ESLLAEIGTA CNKHGVGISG QNSTVGAPDG LKQIKKNMLS ENLNDSFIFQ RIGAQFFAPE 420 HFPLFIEFVR KLNQPELYSG NLPTKEGTTT TTDSVHTRSN LSIHVQSA* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02905 | PLN02905 | 4.0e-77 | 51 | 336 | 293 | + beta-amylase | ||
PLN02801 | PLN02801 | 4.0e-79 | 11 | 447 | 456 | + beta-amylase | ||
PLN02161 | PLN02161 | 6.0e-91 | 15 | 433 | 438 | + beta-amylase | ||
PLN00197 | PLN00197 | 1.0e-98 | 18 | 434 | 432 | + beta-amylase; Provisional | ||
PLN02803 | PLN02803 | 1.0e-102 | 15 | 434 | 430 | + beta-amylase |
Gene Ontology | |
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GO Term | Description |
GO:0000272 | polysaccharide catabolic process |
GO:0016161 | beta-amylase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAD38148.1 | 0 | 17 | 468 | 1 | 450 | AF139501_1 beta-amylase [Prunus armeniaca] |
EMBL | CAI39245.1 | 0 | 14 | 468 | 82 | 536 | beta-amylase [Glycine max] |
EMBL | CAN66037.1 | 0 | 13 | 468 | 83 | 541 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002276777.1 | 0 | 13 | 468 | 83 | 541 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312750.1 | 0 | 13 | 446 | 1 | 436 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1fa2_A | 0 | 14 | 433 | 11 | 444 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
PDB | 1b1y_A | 0 | 14 | 433 | 4 | 436 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
PDB | 1v3i_A | 0 | 13 | 451 | 9 | 459 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
PDB | 1q6g_A | 0 | 13 | 451 | 9 | 459 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
PDB | 1q6d_A | 0 | 13 | 441 | 9 | 450 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |