Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G120600.1 |
Family | GH5 |
Protein Properties | Length: 430 Molecular Weight: 48324.8 Isoelectric Point: 6.2883 |
Chromosome | Chromosome/Scaffold: 05 Start: 25325471 End: 25327304 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 71 | 375 | 6.9e-34 |
NSQPFYVNGFNTYWLMVMAADQSTRGKVSEVFQQASSVGLTVCRTWAFNDGQWRALQKSPSVYDEEVFKALDFVVSEAKKYKIRLMLSLVNNWDAYGGKP QYVKWGKAAGLNLTSDDEFFSHPTLRSYYKAHVKAVVNRVNTFTNITYKDDPTIFAWELMNEPRCTSDPSGDTLQSWIAEMAVYVKSLDAKHLVEIGVEG FYGPSAPARAQFNPNSISQTISDAHLQFTTTWMEAHIEDAEKYLGMPVIFAEFGVSSKDPGYNSSFRDALISTVYKTVLNSTKKGGSGAGSLLWQLFPEG MDNMD |
Full Sequence |
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Protein Sequence Length: 430 Download |
MDTCKRCFLL SLAFLMVFFE KLGTNVVFGF NGNYKHHSPH FSTSQGIYDM EDVEDDGWQM 60 VETKGNQFIV NSQPFYVNGF NTYWLMVMAA DQSTRGKVSE VFQQASSVGL TVCRTWAFND 120 GQWRALQKSP SVYDEEVFKA LDFVVSEAKK YKIRLMLSLV NNWDAYGGKP QYVKWGKAAG 180 LNLTSDDEFF SHPTLRSYYK AHVKAVVNRV NTFTNITYKD DPTIFAWELM NEPRCTSDPS 240 GDTLQSWIAE MAVYVKSLDA KHLVEIGVEG FYGPSAPARA QFNPNSISQT ISDAHLQFTT 300 TWMEAHIEDA EKYLGMPVIF AEFGVSSKDP GYNSSFRDAL ISTVYKTVLN STKKGGSGAG 360 SLLWQLFPEG MDNMDDGYAI VLAKSPSTLN LISLHSSKLA IFNSMCSWKC HWGCKKKNAL 420 ETIIYHDDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.0007 | 133 | 329 | 221 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 0.0007 | 100 | 391 | 343 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
COG3934 | COG3934 | 2.0e-28 | 101 | 395 | 310 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU19893.1 | 0 | 49 | 429 | 52 | 462 | unknown [Glycine max] |
EMBL | CBI18019.1 | 0 | 33 | 429 | 45 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002309191.1 | 0 | 48 | 429 | 5 | 415 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323680.1 | 0 | 47 | 429 | 4 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 1 | 429 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 61 | 400 | 7 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 9.80909e-45 | 69 | 388 | 21 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 9.80909e-45 | 69 | 388 | 21 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 9.80909e-45 | 69 | 388 | 21 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 9.80909e-45 | 69 | 388 | 21 | 373 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |