Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G131400.1 |
Family | CBM43 |
Protein Properties | Length: 333 Molecular Weight: 35639.9 Isoelectric Point: 5.5237 |
Chromosome | Chromosome/Scaffold: 05 Start: 32420718 End: 32422915 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 245 | 326 | 2e-32 |
WCVAKPSVPGPIMQEAMNYACASGADCDSIQPSGPCFQPDTIFAHASYAFNSYWQKTKIAGGTCEFGGTAMLVTVDPSYDGC |
Full Sequence |
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Protein Sequence Length: 333 Download |
MENRLCMFLL FSTMAATLSM HCDARKSMEY IKDPKHQRNS IIKHTKNLEL MSKLMSLVIE 60 QPTDTSNTQP YGVSSPFSLP PFDSLPPENS HPYCVNPPNT PQPPIGTSPS PPSPFYNFPP 120 LGPPPSPPGI VPNPPIIFPG PPGIVPNPPS IFPGPPGIVP NPPSIFPSPP QAIPTPTGYI 180 PSPSGPVLSP PYYELSPPTV VVSPPYNVPS PFGLNPSPPE FLPPIVYPPP TVLPPPNRAP 240 TTALWCVAKP SVPGPIMQEA MNYACASGAD CDSIQPSGPC FQPDTIFAHA SYAFNSYWQK 300 TKIAGGTCEF GGTAMLVTVD PSYDGCHFEY QY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-22 | 244 | 315 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-40 | 244 | 328 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001117621.1 | 0 | 165 | 330 | 248 | 395 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_178066.2 | 0 | 165 | 330 | 249 | 396 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002264966.1 | 0 | 4 | 330 | 9 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 0 | 64 | 322 | 2 | 292 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516415.1 | 0 | 64 | 331 | 2 | 263 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 3e-19 | 245 | 328 | 13 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |