Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G145500.1 |
Family | CE11 |
Protein Properties | Length: 184 Molecular Weight: 20184.2 Isoelectric Point: 8.2773 |
Chromosome | Chromosome/Scaffold: 05 Start: 39391113 End: 39392382 |
Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE11 | 45 | 174 | 5.6e-36 |
SKLLCTSLCKDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDTEVEVPIFDGSANAWVEAIEQVGRKEALDRCGNNVEKLAPYLSEPFYVLRNDSFMV AFPASKVHISCGIDFPKVREIGKQFKSLSF |
Full Sequence |
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Protein Sequence Length: 184 Download |
MRISATINSF KSSNLISWKT TGKLQQTPAG CIELSGKTLQ SGKVSKLLCT SLCKDGYKIR 60 TVEHLLSALE AKGIDNCRIQ IQSLDSEDTE VEVPIFDGSA NAWVEAIEQV GRKEALDRCG 120 NNVEKLAPYL SEPFYVLRND SFMVAFPASK VHISCGIDFP KVREIGKQFK SLSFLTFNRL 180 GCG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK13188 | PRK13188 | 2.0e-19 | 50 | 172 | 132 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
TIGR00325 | lpxC | 1.0e-20 | 47 | 174 | 128 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
COG0774 | LpxC | 3.0e-24 | 48 | 174 | 128 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
pfam03331 | LpxC | 2.0e-26 | 47 | 175 | 129 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
PRK13186 | lpxC | 2.0e-33 | 25 | 174 | 185 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed |
Gene Ontology | |
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GO Term | Description |
GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
GO:0009245 | lipid A biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD94001.1 | 0 | 1 | 171 | 1 | 216 | hypothetical protein [Arabidopsis thaliana] |
EMBL | CBI26831.1 | 0 | 1 | 171 | 1 | 202 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001117351.1 | 0 | 1 | 171 | 1 | 216 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
RefSeq | NP_173874.2 | 0 | 1 | 171 | 1 | 216 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
RefSeq | XP_002281269.1 | 0 | 1 | 171 | 1 | 202 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4fw7_D | 0.00000003 | 31 | 114 | 50 | 124 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 4fw7_C | 0.00000003 | 31 | 114 | 50 | 124 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 4fw7_B | 0.00000003 | 31 | 114 | 50 | 124 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 4fw7_A | 0.00000003 | 31 | 114 | 50 | 124 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
PDB | 4fw6_D | 0.00000003 | 31 | 114 | 50 | 124 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BE053971 | 193 | 1 | 162 | 0 |
BQ405531 | 200 | 7 | 175 | 0 |
CU585894 | 209 | 3 | 179 | 0 |
CO120246 | 108 | 54 | 161 | 0 |
CO120246 | 20 | 164 | 183 | 0.006 |
Sequence Alignments (This image is cropped. Click for full image.) |
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