| Basic Information | |
|---|---|
| Species | Gossypium raimondii |
| Cazyme ID | Gorai.005G149500.1 |
| Family | CE11 |
| Protein Properties | Length: 184 Molecular Weight: 20409.2 Isoelectric Point: 5.6534 |
| Chromosome | Chromosome/Scaffold: 05 Start: 41028172 End: 41029312 |
| Description | UDP-3-O-acyl N-acetylglycosamine deacetylase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE11 | 21 | 172 | 1.49995e-41 |
| SGKVSKVKIWPGFTGQGRYFEFHSNLIPASSDFVRESLLCTSLCRDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDTEVEVPIFDGSANAWVEAIEQ VGRKEALDRCGNNVEKLAPYLSEPFYVSINDSFMVAFPASKVHISCGIDFPK | |||
| Full Sequence |
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| Protein Sequence Length: 184 Download |
| MHLSAAINSF KSSNLISWKT SGKVSKVKIW PGFTGQGRYF EFHSNLIPAS SDFVRESLLC 60 TSLCRDGYKI RTVEHLLSAL EAKGIDNCRI QIQSLDSEDT EVEVPIFDGS ANAWVEAIEQ 120 VGRKEALDRC GNNVEKLAPY LSEPFYVSIN DSFMVAFPAS KVHISCGIDF PKVNSFVLWY 180 ADC* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13188 | PRK13188 | 6.0e-20 | 47 | 171 | 129 | + bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | ||
| TIGR00325 | lpxC | 3.0e-26 | 21 | 171 | 156 | + UDP-3-0-acyl N-acetylglucosamine deacetylase. UDP-3-O-(R-3-hydroxymyristoyl)-GlcNAc deacetylase from E. coli , LpxC, was previously designated EnvA. This enzyme is involved in lipid-A precursor biosynthesis. It is essential for cell viability [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| COG0774 | LpxC | 1.0e-31 | 21 | 171 | 157 | + UDP-3-O-acyl-N-acetylglucosamine deacetylase [Cell envelope biogenesis, outer membrane] | ||
| pfam03331 | LpxC | 2.0e-34 | 21 | 171 | 156 | + UDP-3-O-acyl N-acetylglycosamine deacetylase. The enzymes in this family catalyze the second step in the biosynthetic pathway for lipid A. | ||
| PRK13186 | lpxC | 8.0e-39 | 21 | 171 | 155 | + UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Reviewed | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN61403.1 | 0 | 1 | 173 | 1 | 215 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI26831.1 | 0 | 1 | 173 | 1 | 193 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001117351.1 | 0 | 21 | 173 | 55 | 207 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | NP_173874.2 | 0 | 21 | 173 | 55 | 207 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [Arabidopsis thaliana] |
| RefSeq | XP_002281269.1 | 0 | 1 | 173 | 1 | 193 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4fw7_D | 0.0000000002 | 47 | 125 | 53 | 124 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4fw7_C | 0.0000000002 | 47 | 125 | 53 | 124 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4fw7_B | 0.0000000002 | 47 | 125 | 53 | 124 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4fw7_A | 0.0000000002 | 47 | 125 | 53 | 124 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 4fw6_D | 0.0000000002 | 47 | 125 | 53 | 124 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BE053971 | 193 | 1 | 173 | 0 |
| BQ405531 | 187 | 7 | 173 | 0 |
| CU585894 | 191 | 3 | 173 | 0 |
| FY924070 | 191 | 1 | 171 | 0 |
| HX709271 | 194 | 1 | 173 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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