y
Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G155400.2 |
Family | GT77 |
Protein Properties | Length: 410 Molecular Weight: 46796.4 Isoelectric Point: 6.2227 |
Chromosome | Chromosome/Scaffold: 05 Start: 43796201 End: 43799738 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 158 | 355 | 0 |
LDHLVIIALDEKAYNRCQAVHKHCFSLVTEDVDFQEEAYFMTPNYLKMMWRRIDFLRSVLELGYDFVFTDTDIMWFRDPFPQFFPDADFQIACDHFFGDP DDLNNMPNGGFNYVKSNNRSIAFYKFWYASHETYPGYHDQDVFNKIKFDPLISDIGLKIRFLDTAYFGGLCEPSKDLNLVCTMHANCCYGMDSKLHDL |
Full Sequence |
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Protein Sequence Length: 410 Download |
MASPRLLARF HRRRYPPSTA VSACCPFAPP RSLPLRDCSS AGMSPPKPST LIRRAACLFT 60 LLTLSLLMLY TATDSIRFLH LPSASLSSST LVRIFPSYLN NSPSPNPMQH LKEVLGNASM 120 GNNTVILTTL NDAWASTNSV VDLFLKSFML GDGTHWLLDH LVIIALDEKA YNRCQAVHKH 180 CFSLVTEDVD FQEEAYFMTP NYLKMMWRRI DFLRSVLELG YDFVFTDTDI MWFRDPFPQF 240 FPDADFQIAC DHFFGDPDDL NNMPNGGFNY VKSNNRSIAF YKFWYASHET YPGYHDQDVF 300 NKIKFDPLIS DIGLKIRFLD TAYFGGLCEP SKDLNLVCTM HANCCYGMDS KLHDLKIMLQ 360 DWRAFTSLPP DLKNESVISW RVPQNCSLHS LHHFDSPSPE INVEQEEEN* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 9.0e-68 | 157 | 355 | 208 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAT70491.1 | 0 | 46 | 409 | 3 | 346 | At1g14590 [Arabidopsis thaliana] |
RefSeq | NP_172911.1 | 0 | 3 | 409 | 4 | 378 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002311563.1 | 0 | 111 | 386 | 2 | 277 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315829.1 | 0 | 12 | 407 | 14 | 404 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002521882.1 | 0 | 3 | 397 | 2 | 386 | pentatricopeptide repeat-containing protein, putative [Ricinus communis] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BG446486 | 225 | 1 | 225 | 0 |
DY276307 | 261 | 110 | 370 | 0 |
GR462686 | 257 | 141 | 396 | 0 |
JG629304 | 248 | 157 | 404 | 0 |
DY279129 | 279 | 109 | 387 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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