Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G160300.1 |
Family | GH9 |
Protein Properties | Length: 496 Molecular Weight: 54555.2 Isoelectric Point: 9.1033 |
Chromosome | Chromosome/Scaffold: 05 Start: 46161613 End: 46165096 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 34 | 489 | 0 |
NYHDALRKSILFFEGQRSGRLPPDQRVKWRRDSALHDGSTAGVDLTGGYYDAGDNVKFGFPMAFTTTLLAWSIIDFGRNMGPELKNTVKAVKWSTDYLLK ATEKPGVVYVQVGDAYSDHSCWERPEDMDTLRTVYKIDNAHPGSDVAGETAAALAAASIVFRKRDPAYSRLLLNRAIRVFNFADKHRGAYSSSLHSAVCP FYCDVNGYQDELLWGAAWLHKASRKRVYREYIVKNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGKADYFESFKQNADGFICSLLPGISHPQVQYSP GGLMFKTGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGESSASPALLKHLAKRQVDYILGDNPLGMSYMVGYGARFPRRIHHRGSSLPSVAAHPARIGC KAGTRYYLSPNPNPNLLVGAVVGGPNVSDAFPDSRPYFQESEPTTYINAPLVGLLA |
Full Sequence |
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Protein Sequence Length: 496 Download |
MAPKPLTFPG IFSALLAFSF SLLLFCHPII GGHNYHDALR KSILFFEGQR SGRLPPDQRV 60 KWRRDSALHD GSTAGVDLTG GYYDAGDNVK FGFPMAFTTT LLAWSIIDFG RNMGPELKNT 120 VKAVKWSTDY LLKATEKPGV VYVQVGDAYS DHSCWERPED MDTLRTVYKI DNAHPGSDVA 180 GETAAALAAA SIVFRKRDPA YSRLLLNRAI RVFNFADKHR GAYSSSLHSA VCPFYCDVNG 240 YQDELLWGAA WLHKASRKRV YREYIVKNEV VLRAGDTINE FGWDNKHAGI NVLISKEVLM 300 GKADYFESFK QNADGFICSL LPGISHPQVQ YSPGGLMFKT GGSNMQHVTS LSFLLLAYSN 360 YLSHANKVVP CGESSASPAL LKHLAKRQVD YILGDNPLGM SYMVGYGARF PRRIHHRGSS 420 LPSVAAHPAR IGCKAGTRYY LSPNPNPNLL VGAVVGGPNV SDAFPDSRPY FQESEPTTYI 480 NAPLVGLLAF FSAHP* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02308 | PLN02308 | 0 | 31 | 495 | 465 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 27 | 494 | 468 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 33 | 495 | 466 | + cellulase | ||
pfam00759 | Glyco_hydro_9 | 0 | 34 | 489 | 462 | + Glycosyl hydrolase family 9. | ||
PLN02613 | PLN02613 | 0 | 30 | 489 | 464 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92482.1 | 0 | 1 | 495 | 1 | 496 | unknown [Populus trichocarpa] |
EMBL | CAA67157.1 | 0 | 1 | 494 | 1 | 488 | endo-1,4-beta-glucanase [Arabidopsis thaliana] |
RefSeq | XP_002311518.1 | 0 | 1 | 495 | 1 | 496 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002315868.1 | 0 | 29 | 494 | 13 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527779.1 | 0 | 1 | 494 | 1 | 491 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 33 | 489 | 3 | 426 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 1ksc_A | 0 | 33 | 489 | 3 | 426 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 1ks8_A | 0 | 33 | 489 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 34 | 491 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 34 | 491 | 5 | 440 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |