Basic Information | |
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Species | Gossypium raimondii |
Cazyme ID | Gorai.005G201100.1 |
Family | GH5 |
Protein Properties | Length: 447 Molecular Weight: 51139.4 Isoelectric Point: 9.1133 |
Chromosome | Chromosome/Scaffold: 05 Start: 57711570 End: 57715922 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 66 | 393 | 1.7e-34 |
NGKPLYVNGWNSYWLMAHSVDESSRPKVSAMLQAGAKMGLTVCRTWAFNDGGYNALQISPGQFDERVFKALDYVIAEARQQGIRLLLSLVNNLQPYGGKT QYVNWAWQEGVGLSSSNDSFFFDPSIRKYFKNYVLTVLTRKNTITGIQYRNDPTIFAWELINEPRCMTDPSGDTLQDWLEEMSAFIKSIDKNHLLTIGLE GFYGPSSPKKATVNPEQWASALGADFMRNSNITNVDFASVHIYPDQWFHGLGFEEKRNYVSKWMHSHIEDCDKELKKPVMFTEYGLSDQNKDFQLSQREQ LYRTIQDIIYKSAKKKGSGAGALVWQFF |
Full Sequence |
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Protein Sequence Length: 447 Download |
MKKDLRSHWS LRKMVTRNGM LYPILGFASC VAFLYMSFGD LKLSASFTKG PRFSFVERNG 60 TQFFLNGKPL YVNGWNSYWL MAHSVDESSR PKVSAMLQAG AKMGLTVCRT WAFNDGGYNA 120 LQISPGQFDE RVFKALDYVI AEARQQGIRL LLSLVNNLQP YGGKTQYVNW AWQEGVGLSS 180 SNDSFFFDPS IRKYFKNYVL TVLTRKNTIT GIQYRNDPTI FAWELINEPR CMTDPSGDTL 240 QDWLEEMSAF IKSIDKNHLL TIGLEGFYGP SSPKKATVNP EQWASALGAD FMRNSNITNV 300 DFASVHIYPD QWFHGLGFEE KRNYVSKWMH SHIEDCDKEL KKPVMFTEYG LSDQNKDFQL 360 SQREQLYRTI QDIIYKSAKK KGSGAGALVW QFFVEGMQEY SDDFGMVPWQ SPPIYKLTIE 420 HSCKLARIQG LIQENGNLKQ LCSKRK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.0002 | 101 | 375 | 301 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam12876 | Cellulase-like | 3.0e-6 | 213 | 308 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 5.0e-7 | 216 | 359 | 150 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 3.0e-23 | 63 | 408 | 347 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95966.1 | 0 | 11 | 446 | 1 | 435 | unknown [Populus trichocarpa] |
GenBank | ACN78665.1 | 0 | 12 | 446 | 11 | 443 | endo-beta-mannanase [Malus x domestica] |
EMBL | CBI21857.1 | 0 | 14 | 446 | 1 | 432 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273772.1 | 0 | 13 | 446 | 5 | 437 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002330687.1 | 0 | 11 | 446 | 1 | 435 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 54 | 428 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 65 | 408 | 22 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 65 | 408 | 22 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 65 | 408 | 22 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 65 | 408 | 22 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |